RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 MARCH6O60337 910 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 KRT37O76014 449 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 SLITRK3O94933 977 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 FSHRP23945 695 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 ATXN1P54253 815 aaKnown RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 ARHGAP8P85298 464 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 CREMQ03060 361 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 RABEP1Q15276 862 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 SLC44A4Q53GD3 710 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 LILRA6Q6PI73 481 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 GAD1Q99259 594 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 LXNQ9BS40 222 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
SRP54-203ENST00000553544 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 FNIP2Q9P278 1114 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 PCDHA12Q9UN75 941 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 PPME1Q9Y570 386 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 PCDHGA2Q9Y5H1 932 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 SPTBN2O15020 2390 aa13.12□□□□□ -0.31
SRP54-203ENST00000553544 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 FAM170BA6NMN3 283 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 NEMFO60524 1076 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 LRRN2O75325 713 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 ZMYND10O75800 440 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 LYPLA2O95372 231 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 NPEPPSP55786 919 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 PRKCQQ04759 706 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
SRP54-203ENST00000553544 DSC1Q08554 894 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 PCBP1Q15365 356 aaKnown RBP eCLIP13.11□□□□□ -0.31
SRP54-203ENST00000553544 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
SRP54-203ENST00000553544 CALCRLQ16602 461 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
SRP54-203ENST00000553544 ST13P5Q8NFI4 369 aaPredicted RBP13.11□□□□□ -0.31
SRP54-203ENST00000553544 TMEM143Q96AN5 459 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 NELL2Q99435 816 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 TMEM60Q9H2L4 133 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 DHX33Q9H6R0 707 aaKnown RBP13.11□□□□□ -0.31
SRP54-203ENST00000553544 ZSWIM4Q9H7M6 989 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
SRP54-203ENST00000553544 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 IPPQ9Y573 584 aa13.11□□□□□ -0.31
SRP54-203ENST00000553544 TADA2AO75478 443 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 ERLIN2O94905 339 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 AXLP30530 894 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 RFC5P40937 340 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 MAGEA9P43362 315 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 PFKPQ01813 784 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 UBXN2BQ14CS0 331 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 PARM1Q6UWI2 310 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 GRASPQ7Z6J2 395 aaPredicted RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 HACE1Q8IYU2 909 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 RNF149Q8NC42 400 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 FGF14Q92915 247 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 EIF2AK1Q9BQI3 630 aaKnown RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 DDX23Q9BUQ8 820 aaKnown RBP13.1□□□□□ -0.31
SRP54-203ENST00000553544 GPR62Q9BZJ7 368 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 ZSCAN32Q9NX65 697 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 CDH7Q9ULB5 785 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
SRP54-203ENST00000553544 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 ZBTB39O15060 712 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 NCAM2O15394 837 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 MLH1P40692 756 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 TXKP42681 527 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 SCNN1GP51170 649 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 CYP4A11Q02928 519 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 LMNB2Q03252 620 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
SRP54-203ENST00000553544 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
SRP54-203ENST00000553544 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 FAM184AQ8NB25 1140 aa13.09□□□□□ -0.31
SRP54-203ENST00000553544 CCDC51Q96ER9 411 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms