RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 FPGT-TNNI3KV9GXZ4 949 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 FAM205AQ6ZU69 1335 aa5.65□□□□□ -1.51
ATXN3-220ENST00000553491 RFXAPO00287 272 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 WNT10BO00744 389 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 RAB11FIP3O75154 756 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 FUCA1P04066 466 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 NTRK1P04629 796 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ASGR2P07307 311 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 JMJD7P0C870 316 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 CNGA1P29973 690 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 CACNB3P54284 484 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ZNF280AP59817 542 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 IGBP1P78318 339 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 CAP1Q01518 475 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 TCP10Q12799 353 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 TCERG1LQ5VWI1 586 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 CNKSR3Q6P9H4 555 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 RPUSD2Q8IZ73 545 aaKnown RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ZGPATQ8N5A5 531 aaKnown RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 SPATA5Q8NB90 893 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 TP53I13Q8NBR0 393 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 PCDH19Q8TAB3 1148 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 EAF2Q96CJ1 260 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 KIF1BPQ96EK5 621 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 KCNC2Q96PR1 638 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 LRRCC1Q9C099 1032 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 RNF38Q9H0F5 515 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 BCAS3Q9H6U6 928 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 USP40Q9NVE5 1235 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 TMOD2Q9NZR1 351 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ZNF70Q9UC06 446 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-220ENST00000553491 ATAD5Q96QE3 1844 aa5.64□□□□□ -1.51
ATXN3-220ENST00000553491 UBE2Q2LH0YL09 131 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 TRIM13O60858 407 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 CKMP06732 381 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 LDHCP07864 332 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 NCAM1P13591 858 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 NAT1P18440 290 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 PRDX5P30044 214 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 SOX5P35711 763 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 BCL6P41182 706 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 NEK4P51957 841 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 HUNKP57058 714 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 ANAPC15P60006 121 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 FKBP1AP62942 108 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 PAK1Q13153 545 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 LSAMPQ13449 338 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 TARBP2Q15633 366 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 SEPT7Q16181 437 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 KIZQ2M2Z5 673 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 CST9Q5W186 159 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 CDCA2Q69YH5 1023 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 ZCCHC8Q6NZY4 707 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 MOB2Q70IA6 237 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 APOBEC3FQ8IUX4 373 aaKnown RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 LEO1Q8WVC0 666 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 CDCA5Q96FF9 252 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 ALG1Q9BT22 464 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 RWDD1Q9H446 243 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 GBA2Q9HCG7 927 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-220ENST00000553491 HMG20BQ9P0W2 317 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 PGAP2Q9UHJ9 254 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 RAPGEFL1Q9UHV5 662 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 SIT1Q9Y3P8 196 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 MAST3O60307 1309 aa5.63□□□□□ -1.51
ATXN3-220ENST00000553491 DOCK2Q92608 1830 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 B4E1Z4 1266 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 FFAR3O14843 346 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 KPNA6O60684 536 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 IDH1O75874 414 aaKnown RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MAP4K4O95819 1239 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 SOD2P04179 222 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 HMGB1P09429 215 aaKnown RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PMLP29590 882 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MC3RP41968 323 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MCAMP43121 646 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 LIMS1P48059 325 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MMP14P50281 582 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 RPL11P62913 178 aaKnown RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 GSTO1P78417 241 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MECOMQ03112 1051 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 DLX2Q07687 328 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PICALMQ13492 652 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 SLC9A5Q14940 896 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 SUPT20HL1Q3ZLR7 823 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 NAA16Q6N069 864 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 CYP4F22Q6NT55 531 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PKN3Q6P5Z2 889 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 UBE2R2Q712K3 238 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms