RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GRM5P41594 1212 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 KCNQ1P51787 676 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 TUSC3Q13454 348 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 KYAT1Q16773 422 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 TMEM184AQ6ZMB5 413 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 TMEM173Q86WV6 379 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-204ENST00000553324 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-204ENST00000553324 ADAMTS19Q8TE59 1207 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 DDX12PQ92771 950 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-204ENST00000553324 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 CUEDC2Q9H467 287 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 TBX20Q9UMR3 447 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 GDAQ9Y2T3 454 aa16.81■□□□□ 0.28
SHMT2-204ENST00000553324 GRXCR2A6NFK2 248 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 C2orf71A6NGG8 1288 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 H3BQ06 376 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 AMPD3Q01432 767 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 PKP1Q13835 747 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 PTCRAQ6ISU1 281 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 IQUBQ8NA54 791 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 BICD1Q96G01 975 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 PYM1Q9BRP8 204 aaKnown RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 CDT1Q9H211 546 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 ST6GALNAC4Q9H4F1 302 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-204ENST00000553324 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
SHMT2-204ENST00000553324 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 K7ENM7 598 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 B4GALT3O60512 393 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 TADA2AO75478 443 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 SOD2P04179 222 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 GAP43P17677 238 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 CA8P35219 290 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 ME1P48163 572 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 GTF2BQ00403 316 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 MCL1Q07820 350 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 DYMQ7RTS9 669 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 GPR65Q8IYL9 337 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 SLC38A7Q9NVC3 462 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 MYO7AQ13402 2215 aa16.79■□□□□ 0.28
SHMT2-204ENST00000553324 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 MYMKA6NI61 221 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 PTGESO14684 152 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 LINC01565O15544 149 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 PIGRP01833 764 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 HOXB8P17481 243 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 LIG4P49917 911 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 DNM1Q05193 864 aaKnown RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 DLX2Q07687 328 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 COASYQ13057 564 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 NOLC1Q14978 699 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 XKR4Q5GH76 650 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 ALKAL1Q6UXT8 129 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 PDILTQ8N807 584 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 BCL7CQ8WUZ0 217 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 CASP10Q92851 521 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 MSLNLQ96KJ4 702 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 UROC1Q96N76 676 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 TNMDQ9H2S6 317 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 ADAM28Q9UKQ2 775 aa16.78■□□□□ 0.28
SHMT2-204ENST00000553324 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-204ENST00000553324 ABLIM1O14639 778 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 HNRNPDLO14979 420 aaKnown RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 URODP06132 367 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 KRT85P78386 507 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 SMAD4Q13485 552 aaKnown RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 KCNC3Q14003 757 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 USP41Q3LFD5 358 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 SLFN12LQ6IEE8 588 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 SHC4Q6S5L8 630 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 HVCN1Q96D96 273 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 DNAJC19Q96DA6 116 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 ZBTB45Q96K62 511 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 HERC2P3Q9BVR0 1158 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 MRPL44Q9H9J2 332 aaKnown RBP16.77■□□□□ 0.28
SHMT2-204ENST00000553324 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 MAGEF1Q9HAY2 307 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
SHMT2-204ENST00000553324 CLEC1BQ9P126 229 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms