RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 GLUD2P49448 558 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 SMTNP53814 917 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 SLC12A3P55017 1021 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 DSG1Q02413 1049 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 HERC4Q5GLZ8 1057 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-207ENST00000553290 KIAA1841Q6NSI8 718 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 TAS1R1Q7RTX1 841 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 SPIRE2Q8WWL2 714 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 RIPOR3Q96MK2 946 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 ACO2Q99798 780 aaKnown RBP14.24□□□□□ -0.13
ACTN1-207ENST00000553290 MRPL4Q9BYD3 311 aaKnown RBP14.24□□□□□ -0.13
ACTN1-207ENST00000553290 C11orf16Q9NQ32 467 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 ADAM28Q9UKQ2 775 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 SFI1A8K8P3 1242 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 F8W810 466 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 K7ELQ4 463 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-207ENST00000553290 C2CD2LO14523 706 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 PTGESO14684 152 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 SLC16A4O15374 487 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 TADA2AO75478 443 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 ADH1AP07327 375 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 SYT1P21579 422 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 CLCN4P51793 760 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 STRN3Q13033 797 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-207ENST00000553290 USP41Q3LFD5 358 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 RARS2Q5T160 578 aaKnown RBP14.23□□□□□ -0.13
ACTN1-207ENST00000553290 KIAA0319Q5VV43 1072 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 FUT10Q6P4F1 479 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 TAS1R3Q7RTX0 852 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 RPGRIP1Q96KN7 1286 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 FBXL18Q96ME1 805 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 RXFP1Q9HBX9 757 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 PTPRHQ9HD43 1115 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.23□□□□□ -0.13
ACTN1-207ENST00000553290 CHST7Q9NS84 486 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 LARSQ9P2J5 1176 aaKnown RBP14.23□□□□□ -0.13
ACTN1-207ENST00000553290 DPP7Q9UHL4 492 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 GDAQ9Y2T3 454 aa14.23□□□□□ -0.13
ACTN1-207ENST00000553290 SF3B1O75533 1304 aaKnown RBP eCLIP14.22□□□□□ -0.13
ACTN1-207ENST00000553290 PRR33A8MZF0 331 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 H0YCG3 227 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 C1RP00736 705 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 GRM5P41594 1212 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 YARSP54577 528 aaKnown RBP14.22□□□□□ -0.13
ACTN1-207ENST00000553290 NAB2Q15742 525 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 ZNF568Q3ZCX4 644 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 ATAT1Q5SQI0 421 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 ELMSAN1Q6PJG2 1045 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 RASSF8Q8NHQ8 419 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 TCHPQ9BT92 498 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-207ENST00000553290 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
ACTN1-207ENST00000553290 GPR62Q9BZJ7 368 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 CDT1Q9H211 546 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 SFXN1Q9H9B4 322 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 TOPORSQ9NS56 1045 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-207ENST00000553290 MUTYHQ9UIF7 546 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 ODF2LQ9ULJ1 636 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 NR2E1Q9Y466 385 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 TRIOO75962 3097 aa14.22□□□□□ -0.13
ACTN1-207ENST00000553290 FAM86C2PA6NEL3 165 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 CASTOR2A6NHX0 329 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 TEX28O15482 410 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 MCF2P10911 925 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 SCP2P22307 547 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 CREMQ03060 361 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
ACTN1-207ENST00000553290 RESTQ13127 1097 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 MPZL3Q6UWV2 235 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 GPBP1Q86WP2 473 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-207ENST00000553290 TMEM161BQ8NDZ6 487 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 RABGGTAQ92696 567 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 PAAF1Q9BRP4 392 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 CCSER1Q9C0I3 900 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 POMKQ9H5K3 350 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 BLOC1S4Q9NUP1 217 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 FNIP2Q9P278 1114 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
ACTN1-207ENST00000553290 TRIP11Q15643 1979 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 TOM1L1O75674 476 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 BRD1O95696 1058 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 GLUD1P00367 558 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 MAPTP10636 758 aaKnown RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 PLCG1P19174 1290 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 PROZP22891 400 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 GRIN1Q05586 938 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 DHX8Q14562 1220 aaKnown RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 KARSQ15046 597 aaKnown RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 PTPAQ15257 358 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 C15orf39Q6ZRI6 1047 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 ZBTB33Q86T24 672 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 HDAC7Q8WUI4 952 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 RIN2Q8WYP3 895 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 RAD54LQ92698 747 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 UROC1Q96N76 676 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms