RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PANK2Q9BZ23 570 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 BARX2Q9UMQ3 279 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 CTSAP10619 480 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 NDUFV1P49821 464 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 STRN3Q13033 797 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 KCNC3Q14003 757 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 PTCRAQ6ISU1 281 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-217ENST00000553145 DYMQ7RTS9 669 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 HAUS6Q7Z4H7 955 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 MYCT1Q8N699 235 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 RABGGTAQ92696 567 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 MSLNLQ96KJ4 702 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 CDCA3Q99618 268 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-217ENST00000553145 ZHX3Q9H4I2 956 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 PARVGQ9HBI0 331 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 KCNG1Q9UIX4 513 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 ZDHHC9Q9Y397 364 aa20.61■□□□□ 0.89
HDAC4-217ENST00000553145 GRXCR2A6NFK2 248 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 MYMKA6NI61 221 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 K7ENM7 598 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 TBCAO75347 108 aaKnown RBP20.6■□□□□ 0.89
HDAC4-217ENST00000553145 CXCL14O95715 111 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 EFEMP2O95967 443 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 CA8P35219 290 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 GRM5P41594 1212 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 STAT6P42226 847 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 OSTNP61366 133 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 DNM1Q05193 864 aaKnown RBP20.6■□□□□ 0.89
HDAC4-217ENST00000553145 NAB2Q15742 525 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 MPZL3Q6UWV2 235 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 CCDC73Q6ZRK6 1079 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 PDILTQ8N807 584 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 KCNN1Q92952 543 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 PAAF1Q9BRP4 392 aa20.6■□□□□ 0.89
HDAC4-217ENST00000553145 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 TRAK2O60296 914 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 BRD1O95696 1058 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 MCF2P10911 925 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 HARSP12081 509 aaKnown RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 NMT1P30419 496 aaKnown RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 GLRA4Q5JXX5 417 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 AXDND1Q5T1B0 1012 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 APBB1IPQ7Z5R6 666 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 RNF168Q8IYW5 571 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-217ENST00000553145 DDX12PQ92771 950 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 HAPLN2Q9GZV7 340 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 ANKFY1Q9P2R3 1169 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 IRAK3Q9Y616 596 aa20.59■□□□□ 0.89
HDAC4-217ENST00000553145 CASTOR2A6NHX0 329 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 H0YCG3 227 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 MEFVO15553 781 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-217ENST00000553145 CUTAO60888 179 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 CLASP2O75122 1294 aaKnown RBP20.58■□□□□ 0.89
HDAC4-217ENST00000553145 TOM1L1O75674 476 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 TUSC3Q13454 348 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 PTPN14Q15678 1187 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 LLGL2Q6P1M3 1020 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 ZPBP2Q6X784 338 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 SV2BQ7L1I2 683 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 SFR1Q86XK3 245 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 DNAJC19Q96DA6 116 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 CHAMP1Q96JM3 812 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 HERC2P3Q9BVR0 1158 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 CD207Q9UJ71 328 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 TBX20Q9UMR3 447 aa20.58■□□□□ 0.89
HDAC4-217ENST00000553145 MBTPS2O43462 519 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 SOD2P04179 222 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 THP07101 528 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 NOLC1Q14978 699 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC4-217ENST00000553145 E2F4Q16254 413 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 PUS10Q3MIT2 529 aaKnown RBP20.57■□□□□ 0.88
HDAC4-217ENST00000553145 SEZ6Q53EL9 994 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 FAM178BQ8IXR5 827 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 PPP1R10Q96QC0 940 aaKnown RBP20.57■□□□□ 0.88
HDAC4-217ENST00000553145 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-217ENST00000553145 COLEC11Q9BWP8 271 aa20.57■□□□□ 0.88
HDAC4-217ENST00000553145 CUL9Q8IWT3 2517 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 FSD2A1L4K1 749 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 LILRB3O75022 631 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 NR1I2O75469 434 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 PIGRP01833 764 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 MCL1Q07820 350 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 COASYQ13057 564 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 SMAD4Q13485 552 aaKnown RBP20.56■□□□□ 0.88
HDAC4-217ENST00000553145 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-217ENST00000553145 ZC2HC1CQ53FD0 456 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-217ENST00000553145 XKR4Q5GH76 650 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 ATL3Q6DD88 541 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 ALKAL1Q6UXT8 129 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 TMEM184AQ6ZMB5 413 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 SMRP1Q8NCR6 262 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 KCNG4Q8TDN1 519 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 BICD1Q96G01 975 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 SNX27Q96L92 541 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 GPR62Q9BZJ7 368 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 ADAM28Q9UKQ2 775 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms