RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 MCL1Q07820 350 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 NAB2Q15742 525 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 MAPK6Q16659 721 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 DGKDQ16760 1214 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 ZACNQ401N2 412 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 PAPD7Q5XG87 772 aaKnown RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 ZBTB8OSQ8IWT0 167 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 SECISBP2LQ93073 1101 aaKnown RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 ZNF668Q96K58 619 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
PFDN5-216ENST00000552341 CARD6Q9BX69 1037 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 ZFYVE28Q9HCC9 887 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 CDC23Q9UJX2 597 aa11.74□□□□□ -0.53
PFDN5-216ENST00000552341 ACKR2O00590 384 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 KIF3CO14782 793 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 CLDN3O15551 220 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
PFDN5-216ENST00000552341 CYP2C19P33261 490 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 TNFSF9P41273 254 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 TFDP1Q14186 410 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 SEZ6Q53EL9 994 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 C10orf76Q5T2E6 689 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 TDRD10Q5VZ19 366 aaKnown RBP11.73□□□□□ -0.53
PFDN5-216ENST00000552341 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 RNF10Q8N5U6 811 aaKnown RBP11.73□□□□□ -0.53
PFDN5-216ENST00000552341 SHC3Q92529 594 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 HHIPL1Q96JK4 782 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 NLRP4Q96MN2 994 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 RBAKQ9NYW8 714 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-216ENST00000552341 ATP8B3O60423 1300 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 ANK1P16157 1881 aa11.73□□□□□ -0.53
PFDN5-216ENST00000552341 BTNL10A8MVZ5 291 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 ENC1O14682 589 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 B4GALT5O43286 388 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TADA3O75528 432 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 MOCS3O95396 460 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 VNN1O95497 513 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 ATP1A1P05023 1023 aaKnown RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 CBX1P83916 185 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 SREBF2Q12772 1141 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TUBB2AQ13885 445 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 AMHR2Q16671 573 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 LMBRD2Q68DH5 695 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 FMNL3Q8IVF7 1028 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 FAM71AQ8IYT1 594 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TRIM58Q8NG06 486 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 KAT2BQ92831 832 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TATDN2Q93075 761 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 LENG1Q96BZ8 264 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TUBB2BQ9BVA1 445 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 ANO9A1A5B4 782 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 OGTO15294 1046 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 DYNC1LI2O43237 492 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 F2P00734 622 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 CYP2B6P20813 491 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 RGS2P41220 211 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 GRIK4Q16099 956 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 FAM187BQ17R55 369 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 TXLNBQ8N3L3 684 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 APBA2Q99767 749 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.539e-15■■■■■ 186.3
PFDN5-216ENST00000552341 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 CPSF3Q9UKF6 684 aaKnown RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-216ENST00000552341 DNAH12Q6ZR08 3092 aa11.72□□□□□ -0.53
PFDN5-216ENST00000552341 A0A087WZ62 844 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 CA12O43570 354 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.537e-6■□□□□ 10.1
PFDN5-216ENST00000552341 CCDC172P0C7W6 258 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 TNNI1P19237 187 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 GCNT1Q02742 428 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 ERCC6LQ2NKX8 1250 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 ATF7IP2Q5U623 682 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 EEF1DP3Q658K8 133 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 ZBTB33Q86T24 672 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 PALB2Q86YC2 1186 aa11.71□□□□□ -0.53
PFDN5-216ENST00000552341 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms