RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 DLX2Q07687 328 aaPredicted RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 HYAL1Q12794 435 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 SPOUT1Q5T280 376 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 NT5DC1Q5TFE4 455 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 ADGRD2Q7Z7M1 963 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 CDR2LQ86X02 465 aaPredicted RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 RNF169Q8NCN4 708 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 SPPL3Q8TCT6 385 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 STAMQ92783 540 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
CDK4-211ENST00000552254 TNMDQ9H2S6 317 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 ZHX3Q9H4I2 956 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 KBTBD4Q9NVX7 518 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 HPSEQ9Y251 543 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 USP20Q9Y2K6 914 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 PCDHB2Q9Y5E7 798 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 PHLPP2Q6ZVD8 1323 aa10.07□□□□□ -0.8
CDK4-211ENST00000552254 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 GCN1Q92616 2671 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 FAM237AA0A1B0GTK4 181 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 MEIS3P2A8K0S8 358 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 H0Y858 1186 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 N4BP3O15049 544 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TRAK2O60296 914 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TBCAO75347 108 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 PFKFB1P16118 471 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 LTBRP36941 435 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 NDUFV1P49821 464 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 LONRF3Q496Y0 759 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 CLLU1OSQ5K130 101 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 HAUS6Q7Z4H7 955 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 POF1BQ8WVV4 589 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 KCNN1Q92952 543 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 LPPQ93052 612 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 PGBD4Q96DM1 585 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 CASD1Q96PB1 797 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 FIZ1Q96SL8 496 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 PYM1Q9BRP8 204 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 LRRC27Q9C0I9 530 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TMEM117Q9H0C3 514 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 PDZD7Q9H5P4 517 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 MAGEF1Q9HAY2 307 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TLR9Q9NR96 1032 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 SERTAD1Q9UHV2 236 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 CD207Q9UJ71 328 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 RWDD3Q9Y3V2 267 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 IPPQ9Y573 584 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 TECTAO75443 2155 aa10.06□□□□□ -0.8
CDK4-211ENST00000552254 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
CDK4-211ENST00000552254 FRMD3A2A2Y4 597 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 H0YCG3 227 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 HOXA2O43364 376 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 ACTN4O43707 911 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 NPTXRO95502 500 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 GAP43P17677 238 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 PBX3P40426 434 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 NDUFA8P51970 172 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 VCPP55072 806 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 ZXDAP98168 799 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 AMPD3Q01432 767 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 ATF7IP2Q5U623 682 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 EEF1DP3Q658K8 133 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 CNNM4Q6P4Q7 775 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 AGMOQ6ZNB7 445 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 RBM23Q86U06 439 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 SFR1Q86XK3 245 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 HELQQ8TDG4 1101 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 P2RX5Q93086 422 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 CNTNAP3BQ96NU0 1288 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 IPO9Q96P70 1041 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 PLVAPQ9BX97 442 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 MRPL4Q9BYD3 311 aaKnown RBP10.05□□□□□ -0.8
CDK4-211ENST00000552254 CNTNAP3Q9BZ76 1288 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 TRIM9Q9C026 710 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 LMAN2LQ9H0V9 348 aa10.05□□□□□ -0.8
CDK4-211ENST00000552254 RNF39Q9H2S5 420 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms