RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ZBTB33Q86T24 672 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 P2RX5Q93086 422 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 HVCN1Q96D96 273 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 SNX27Q96L92 541 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 CWH43Q9H720 699 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 CD320Q9NPF0 282 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 TBC1D13Q9NVG8 400 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 LMCD1Q9NZU5 365 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 HNRNPDLO14979 420 aaKnown RBP11.62□□□□□ -0.55
PTCH1-225ENST00000551845 NR1I2O75469 434 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 POMCP01189 267 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 PROZP22891 400 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 SSTR3P32745 418 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KRT17Q04695 432 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 COASYQ13057 564 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 CUL4BQ13620 913 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 POSTNQ15063 836 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KYAT1Q16773 422 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KRBA2Q6ZNG9 492 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 THNSL1Q8IYQ7 743 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 SYCP3Q8IZU3 236 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KLHL23Q8NBE8 558 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 CCDC47Q96A33 483 aaKnown RBP11.62□□□□□ -0.55
PTCH1-225ENST00000551845 ZBTB45Q96K62 511 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-225ENST00000551845 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 ACCSQ96QU6 501 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 RPS6KC1Q96S38 1066 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 NXF3Q9H4D5 531 aaKnown RBP11.62□□□□□ -0.55
PTCH1-225ENST00000551845 NRDE2Q9H7Z3 1164 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 TMEM206Q9H813 350 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 MIOSQ9NXC5 875 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 KLK14Q9P0G3 267 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 GDAQ9Y2T3 454 aa11.62□□□□□ -0.55
PTCH1-225ENST00000551845 WDR81Q562E7 1941 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 TTC3P53804 2025 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 INPPL1O15357 1258 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 PIGRP01833 764 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 HARSP12081 509 aaKnown RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 CASP1P29466 404 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 MLH1P40692 756 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 GRM5P41594 1212 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 AFF1P51825 1210 aaKnown RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 BCAR1P56945 870 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 OSTNP61366 133 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 MCL1Q07820 350 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 PSMD2Q13200 908 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 L1TD1Q5T7N2 865 aaKnown RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 ZNF280BQ86YH2 543 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 MAP4K3Q8IVH8 894 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 GRAMD1CQ8IYS0 662 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 GJD3Q8N144 294 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 COLGALT1Q8NBJ5 622 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 SPPL3Q8TCT6 385 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 MICAL1Q8TDZ2 1067 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 STRA6Q9BX79 667 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 LMAN2LQ9H0V9 348 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 CDT1Q9H211 546 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 GOLPH3LQ9H4A5 285 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 ALG13Q9NP73 1137 aaKnown RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 TOPORSQ9NS56 1045 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 ANKFY1Q9P2R3 1169 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 HOOK1Q9UJC3 728 aaKnown RBP11.61□□□□□ -0.55
PTCH1-225ENST00000551845 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 REV3LO60673 3130 aa11.61□□□□□ -0.55
PTCH1-225ENST00000551845 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 ABLIM1O14639 778 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 LPXNO60711 386 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 PRPF40AO75400 957 aaKnown RBP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 PPP1R37O75864 691 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 FGF18O76093 207 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 RECQL4O94761 1208 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 DDHD2O94830 711 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 PRPF6O94906 941 aaKnown RBP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 ITGB1P05556 798 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 THP07101 528 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 GALTP07902 379 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 CLTAP09496 248 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 MYBP10242 640 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 ALADP13716 330 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 PPM1AP35813 382 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 SCNN1GP51170 649 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 NHLH1Q02575 133 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 UBE3AQ05086 875 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 BMS1Q14692 1282 aaKnown RBP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms