RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
GPN3-208ENST00000550974 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 RABGGTAQ92696 567 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 FDXACB1Q9BRP7 624 aaPredicted RBP12.72□□□□□ -0.37
GPN3-208ENST00000550974 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
GPN3-208ENST00000550974 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
GPN3-208ENST00000550974 MEFVO15553 781 aaPredicted RBP12.71□□□□□ -0.37
GPN3-208ENST00000550974 POU2F2P09086 479 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 GBP1P32455 592 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 VIPR2P41587 438 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 FAM193AP78312 1265 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 DRP2Q13474 957 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 PON2Q15165 354 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 PKN3Q6P5Z2 889 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 CEP57Q86XR8 500 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 TTC8Q8TAM2 541 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.37
GPN3-208ENST00000550974 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.37
GPN3-208ENST00000550974 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
GPN3-208ENST00000550974 LAMA1P25391 3075 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 CELSR3Q9NYQ7 3312 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 ADAM12O43184 909 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 MLLT6P55198 1093 aaPredicted RBP12.7□□□□□ -0.38
GPN3-208ENST00000550974 DSC1Q08554 894 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 SEC23AQ15436 765 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 ZNF423Q2M1K9 1284 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
GPN3-208ENST00000550974 SYNPOQ8N3V7 929 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
GPN3-208ENST00000550974 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 INO80BQ9C086 356 aaPredicted RBP12.7□□□□□ -0.38
GPN3-208ENST00000550974 MIOSQ9NXC5 875 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 GABBR1Q9UBS5 961 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 WDR81Q562E7 1941 aa12.7□□□□□ -0.38
GPN3-208ENST00000550974 TENM4Q6N022 2769 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 F5P12259 2224 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
GPN3-208ENST00000550974 PYCARD-AS1I3L0S3 204 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 ARNTLO00327 626 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 ZNF862O60290 1169 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 TADA2AO75478 443 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 ITGA4P13612 1032 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 MLH1P40692 756 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 SCNN1GP51170 649 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 CCINQ13939 588 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
GPN3-208ENST00000550974 PSMD5Q16401 504 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 CEP55Q53EZ4 464 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 YAF2Q8IY57 180 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 TCEAL4Q96EI5 215 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 ZSWIM3Q96MP5 696 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 GAD1Q99259 594 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 KRT23Q9C075 422 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
GPN3-208ENST00000550974 SEC63Q9UGP8 760 aaKnown RBP12.69□□□□□ -0.38
GPN3-208ENST00000550974 INVSQ9Y283 1065 aa12.69□□□□□ -0.38
GPN3-208ENST00000550974 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 NOTCH4Q99466 2003 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 ARL5CA6NH57 179 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 PTPN2P17706 415 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 CTHP32929 405 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 KCNC4Q03721 635 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
GPN3-208ENST00000550974 LMAN2Q12907 356 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 SEMA3BQ13214 749 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
GPN3-208ENST00000550974 CYP2U1Q7Z449 544 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
GPN3-208ENST00000550974 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
GPN3-208ENST00000550974 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 PGBD1Q96JS3 809 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 FAM167AQ96KS9 214 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 HHIPQ96QV1 700 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 CORO1BQ9BR76 489 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 UBN1Q9NPG3 1134 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
GPN3-208ENST00000550974 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
GPN3-208ENST00000550974 NCANO14594 1321 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 MYBPHLA2RUH7 354 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 HEPACAM2A8MVW5 462 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 PSAPP07602 524 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 CDC42EP1Q00587 391 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 PRSS36Q5K4E3 855 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 RHPN2Q8IUC4 686 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 MFSD6LQ8IWD5 586 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms