RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 Q6ZVL8 140 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 TRMT2AQ8IZ69 625 aaKnown RBP7.04□□□□□ -1.28
LETMD1-226ENST00000550755 SYNE4Q8N205 404 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 SLC16A11Q8NCK7 471 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 REPS2Q8NFH8 660 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
LETMD1-226ENST00000550755 SLC2A13Q96QE2 648 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
LETMD1-226ENST00000550755 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 KRTAP4-11Q9BYQ6 195 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 PCDH12Q9NPG4 1184 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 ZNF277Q9NRM2 450 aaPredicted RBP7.04□□□□□ -1.28
LETMD1-226ENST00000550755 TMEM140Q9NV12 185 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 MOCS1Q9NZB8 636 aa7.04□□□□□ -1.28
LETMD1-226ENST00000550755 KLHL33A6NCF5 533 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 PJA2O43164 708 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
LETMD1-226ENST00000550755 PPFIA4O75335 1185 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 ADH4P08319 380 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 SNRPA1P09661 255 aaKnown RBP7.03□□□□□ -1.28
LETMD1-226ENST00000550755 RBP3P10745 1247 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 PPP3CAQ08209 521 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 MGAT2Q10469 447 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 MTMR1Q13613 665 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 BMT2Q1RMZ1 405 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 GPRIN1Q7Z2K8 1008 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 ZNF572Q7Z3I7 529 aaPredicted RBP7.03□□□□□ -1.28
LETMD1-226ENST00000550755 ZNF276Q8N554 614 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 C1orf162Q8NEQ5 155 aaPredicted RBP7.03□□□□□ -1.28
LETMD1-226ENST00000550755 OR10H5Q8NGA6 315 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 CYFIP2Q96F07 1278 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 CEP95Q96GE4 821 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 FAXDC2Q96IV6 333 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 C7orf25Q9BPX7 421 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 MANSC1Q9H8J5 431 aa7.03□□□□□ -1.28
LETMD1-226ENST00000550755 SHTN1A0MZ66 631 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 ANKRD62A6NC57 917 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 TEX33O43247 280 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 NARSO43776 548 aaKnown RBP7.02□□□□□ -1.29
LETMD1-226ENST00000550755 AKAP8O43823 692 aaKnown RBP7.02□□□□□ -1.29
LETMD1-226ENST00000550755 KATNA1O75449 491 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 ACVRL1P37023 503 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 SLC16A1P53985 500 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 CLRN1P58418 232 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 SP140Q13342 867 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 ABCB5Q2M3G0 1257 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 INAVAQ3KP66 663 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 ANKS6Q68DC2 871 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 HAS1Q92839 578 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 KCNH6Q9H252 994 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 NRDE2Q9H7Z3 1164 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 MMRN2Q9H8L6 949 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 SLC2A4RGQ9NR83 387 aa7.02□□□□□ -1.29
LETMD1-226ENST00000550755 DIRC3C9JPN6 131 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 RPS6KA4O75676 772 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 RAP2AP10114 183 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 APOBEC3AP31941 199 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 SREBF1P36956 1147 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 EVA1CP58658 441 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 SLC25A3Q00325 362 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 PTPROQ16827 1216 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 ATXN7L2Q5T6C5 722 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 PNMA8AQ86V59 439 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 ZFPM1Q8IX07 1006 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 CBARPQ8N350 705 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 RNF169Q8NCN4 708 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 FBXO18Q8NFZ0 1043 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 SCAND2PQ9GZW5 306 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 CCDC8Q9H0W5 538 aaPredicted RBP7.01□□□□□ -1.29
LETMD1-226ENST00000550755 TRPM5Q9NZQ8 1165 aa7.01□□□□□ -1.29
LETMD1-226ENST00000550755 CXorf49A8MYA2 514 aaPredicted RBP7□□□□□ -1.29
LETMD1-226ENST00000550755 NDUFS2O75306 463 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 SPATA31D3P0C874 917 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 ALOX15P16050 662 aaPredicted RBP7□□□□□ -1.29
LETMD1-226ENST00000550755 CCND1P24385 295 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 NHLH2Q02577 135 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 AFMIDQ63HM1 303 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 SPATA31D4Q6ZUB0 917 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 MIGA2Q7L4E1 593 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 STON2Q8WXE9 905 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 HOXB13Q92826 284 aaPredicted RBP7□□□□□ -1.29
LETMD1-226ENST00000550755 CLIP3Q96DZ5 547 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 LDAHQ9H6V9 325 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 AJAP1Q9UKB5 411 aaPredicted RBP7□□□□□ -1.29
LETMD1-226ENST00000550755 INTUQ9ULD6 942 aa7□□□□□ -1.29
LETMD1-226ENST00000550755 GRXCR1A8MXD5 290 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 GPR32O75388 356 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 ATP5JP18859 108 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 NCLP19338 710 aaKnown RBP6.99□□□□□ -1.29
LETMD1-226ENST00000550755 RAP2BP61225 183 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 ATP2B3Q16720 1220 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 GDF7Q7Z4P5 450 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 RHOT1Q8IXI2 618 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 DRC7Q8IY82 874 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 SLC35B2Q8TB61 432 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 CCHCR1Q8TD31 782 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 NRG4Q8WWG1 115 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms