RNA–Protein interactions for RNA: ENST00000550555.1

PAN2-216, Transcript of poly(A) specific ribonuclease subunit PAN2, human

TSL 4

Gene PAN2, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAN2-216	ENST00000550555	MMTAG2	Q9BU76	263 aa	Known RBP	13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	COLEC11	Q9BWP8	271 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	SMOC2	Q9H3U7	446 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	LRWD1	Q9UFC0	647 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	PARP2	Q9UGN5	583 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	USP20	Q9Y2K6	914 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	MYH11	P35749	1972 aa		13.14	□□□□□ -0.31
PAN2-216	ENST00000550555	PDCD11	Q14690	1871 aa	Known RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	PP2D1	A8MPX8	630 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	LAD1	O00515	517 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	N4BP1	O75113	896 aa	Known RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	KIF4A	O95239	1232 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	PDGFB	P01127	241 aa	Predicted RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	ASGR2	P07307	311 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	EFNA5	P52803	228 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	TCF15	Q12870	199 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	MAPK7	Q13164	816 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	GNL2	Q13823	731 aa	Known RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	DCAF4L1	Q3SXM0	396 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	NT5DC1	Q5TFE4	455 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	LILRA6	Q6PI73	481 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	CCDC149	Q6ZUS6	474 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	SUGP1	Q8IWZ8	645 aa	Known RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	DEPTOR	Q8TB45	409 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	SNX29	Q8TEQ0	813 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	RABGGTA	Q92696	567 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	KIFAP3	Q92845	792 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	ZNF707	Q96C28	371 aa	Predicted RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	DDX19A	Q9NUU7	478 aa	Known RBP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	SNTG2	Q9NY99	539 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	FNIP2	Q9P278	1114 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	KIAA1024	Q9UPX6	916 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	CIT	O14578	2027 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	USP34	Q70CQ2	3546 aa		13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
PAN2-216	ENST00000550555	CASTOR2	A6NHX0	329 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	NR1I2	O75469	434 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	CENPB	P07199	599 aa	Predicted RBP	13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	USP41	Q3LFD5	358 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	RTP2	Q5QGT7	225 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	CYP26C1	Q6V0L0	522 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	TAS1R3	Q7RTX0	852 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	KCNK18	Q7Z418	384 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	ZBTB33	Q86T24	672 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	PLCD3	Q8N3E9	789 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	HDAC7	Q8WUI4	952 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	RUSC1	Q9BVN2	902 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	POLD4	Q9HCU8	107 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	WDR6	Q9NNW5	1121 aa	Known RBP	13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	ARHGAP28	Q9P2N2	729 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	DAXX	Q9UER7	740 aa	Predicted RBP	13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	LIMD1	Q9UGP4	676 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	STK24	Q9Y6E0	443 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	PHLPP2	Q6ZVD8	1323 aa		13.12	□□□□□ -0.31
PAN2-216	ENST00000550555	VPS13A	Q96RL7	3174 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555		E9PMD0	336 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	ABLIM1	O14639	778 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	TGM5	O43548	720 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	RFPL2	O75678	378 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	RPL17	P18621	184 aa	Known RBP	13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	NPTX2	P47972	431 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	ATP2C1	P98194	919 aa	Predicted RBP	13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	CREM	Q03060	361 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	HYI	Q5T013	277 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	ATF7IP2	Q5U623	682 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	C1orf186	Q6ZWK4	172 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	OTOP3	Q7RTS5	596 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	RIN2	Q8WYP3	895 aa	Predicted RBP	13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	PIK3R5	Q8WYR1	880 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	TMX3	Q96JJ7	454 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	IFT74	Q96LB3	600 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	PPP1R10	Q96QC0	940 aa	Known RBP	13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	PRRX2	Q99811	253 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	ADPGK	Q9BRR6	497 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	RAB34	Q9BZG1	259 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	PLEKHA4	Q9H4M7	779 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	PTPRH	Q9HD43	1115 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	TNFSF13B	Q9Y275	285 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	CLUH	O75153	1309 aa		13.11	□□□□□ -0.31
PAN2-216	ENST00000550555	NOTCH4	Q99466	2003 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	MYO15A	Q9UKN7	3530 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	CCDC195	A0A1B0GUA6	201 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	TMEM189-UBE2V1	I3L0A0	370 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	HIP1R	O75146	1068 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	TH	P07101	528 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	PROZ	P22891	400 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	CDC25A	P30304	524 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	AVPR2	P30518	371 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	MRE11	P49959	708 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	PTPN5	P54829	565 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	RILPL1	Q5EBL4	403 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	XKR4	Q5GH76	650 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	KRT79	Q5XKE5	535 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	RINT1	Q6NUQ1	792 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	CD300LG	Q6UXG3	332 aa		13.1	□□□□□ -0.31
PAN2-216	ENST00000550555	ALYREF	Q86V81	257 aa	Known RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms