RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 GSTCDQ8NEC7 633 aa25.51■■□□□ 1.67
SMARCD1-209ENST00000550477 NKD2Q969F2 451 aaPredicted RBP25.51■■□□□ 1.67
SMARCD1-209ENST00000550477 POLR3CQ9BUI4 534 aaPredicted RBP25.51■■□□□ 1.67
SMARCD1-209ENST00000550477 PRKD2Q9BZL6 878 aa25.51■■□□□ 1.67
SMARCD1-209ENST00000550477 ZFP37Q9Y6Q3 630 aaPredicted RBP25.51■■□□□ 1.67
SMARCD1-209ENST00000550477 ORC2Q13416 577 aaPredicted RBP25.5■■□□□ 1.67
SMARCD1-209ENST00000550477 PRPF4BQ13523 1007 aaKnown RBP25.5■■□□□ 1.67
SMARCD1-209ENST00000550477 FEZF2Q8TBJ5 459 aa25.5■■□□□ 1.67
SMARCD1-209ENST00000550477 FZD8Q9H461 694 aa25.5■■□□□ 1.67
SMARCD1-209ENST00000550477 PLXNA3P51805 1871 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 A0A087WWV3 80 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 ARHGEF35A5YM69 484 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 CFHP08603 1231 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 SPATA31C1P0DKV0 1188 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 HAUS3Q68CZ6 603 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 CWF19L1Q69YN2 538 aaKnown RBP25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 SLC44A3Q8N4M1 653 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 DEPTORQ8TB45 409 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 B3GALT6Q96L58 329 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 TTPALQ9BTX7 342 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 GPRC5CQ9NQ84 441 aa25.49■■□□□ 1.67
SMARCD1-209ENST00000550477 F8W810 466 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 JAK2O60674 1132 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 ZMYND10O75800 440 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 LARGE1O95461 756 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 SRFP11831 508 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 RPA1P27694 616 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 LIN9Q5TKA1 542 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 CDCA2Q69YH5 1023 aaPredicted RBP25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 LILRA6Q6PI73 481 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 PADI6Q6TGC4 694 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 CEP57Q86XR8 500 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 CCDC105Q8IYK2 499 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 ZNF707Q96C28 371 aaPredicted RBP25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 IFT74Q96LB3 600 aa25.48■■□□□ 1.67
SMARCD1-209ENST00000550477 ZFHX2Q9C0A1 2572 aaPredicted RBP25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 PAPLNO95428 1278 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 LAMP2P13473 410 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 NPR3P17342 541 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 MUTP22033 750 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 NAMPTP43490 491 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 GNL2Q13823 731 aaKnown RBP25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 GET4Q7L5D6 327 aaPredicted RBP25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 DTWD2Q8NBA8 298 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 TMEM60Q9H2L4 133 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 SNTG2Q9NY99 539 aa25.47■■□□□ 1.67
SMARCD1-209ENST00000550477 CASTOR2A6NHX0 329 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 ACKR2O00590 384 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 NARSO43776 548 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 N4BP1O75113 896 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 MED24O75448 989 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 PRKCBP05771 671 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 HNRNPA1P09651 372 aaKnown RBP eCLIP25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 OR52Z1P0C646 297 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 RPL17P18621 184 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 LIG1P18858 919 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 CYP11B2P19099 503 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 FAM171A1Q5VUB5 890 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 RSAD2Q8WXG1 361 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 RABGGTAQ92696 567 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 C8orf76Q96K31 380 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 MYADMQ96S97 322 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 STK24Q9Y6E0 443 aa25.46■■□□□ 1.67
SMARCD1-209ENST00000550477 PRR23AA6NEV1 266 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 PI15O43692 258 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 XYLBO75191 536 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 FSHRP23945 695 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 EFNA5P52803 228 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 ANGPT1Q15389 498 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 PSMD5Q16401 504 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 DCAF4L1Q3SXM0 396 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 PPM1LQ5SGD2 360 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 ASCL5Q7RTU5 278 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 PIK3R5Q8WYR1 880 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 FOXP1Q9H334 677 aaPredicted RBP25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 PDZD7Q9H5P4 517 aa25.45■■□□□ 1.66
SMARCD1-209ENST00000550477 WNT7AO00755 349 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 ZNF174Q15697 407 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 RTP2Q5QGT7 225 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 PRSS55Q6UWB4 352 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 FRMD5Q7Z6J6 570 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 HASPINQ8TF76 798 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 FBXW11Q9UKB1 542 aa25.44■■□□□ 1.66
SMARCD1-209ENST00000550477 RECQL4O94761 1208 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 GUCY1B3Q02153 619 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 POTEGQ6S5H5 508 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 KIFAP3Q92845 792 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 LLPHQ9BRT6 129 aaKnown RBP25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 RAB34Q9BZG1 259 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 PPP4R2Q9NY27 417 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 CA14Q9ULX7 337 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 NOL7Q9UMY1 257 aaKnown RBP25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 LIMCH1Q9UPQ0 1083 aa25.43■■□□□ 1.66
SMARCD1-209ENST00000550477 TRAPPC3O43617 180 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 KIF4AO95239 1232 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 HOXA9P31269 272 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 UVSSAQ2YD98 709 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 NOSTRINQ8IVI9 506 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 LNX1Q8TBB1 728 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms