RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 HELQQ8TDG4 1101 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 PGBD4Q96DM1 585 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 SAAL1Q96ER3 474 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
RAB5C-206ENST00000550406 HSPBP1Q9NZL4 362 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 KLK14Q9P0G3 267 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 CPSF3Q9UKF6 684 aaKnown RBP14.24□□□□□ -0.13
RAB5C-206ENST00000550406 TRAF3IP3Q9Y228 551 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 YBX2Q9Y2T7 364 aaKnown RBP14.24□□□□□ -0.13
RAB5C-206ENST00000550406 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 TRIM49BA6NDI0 452 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 INPPL1O15357 1258 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 ADRB2P07550 413 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 CCNE1P24864 410 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 WNT7BP56706 349 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 SNRPFP62306 86 aaKnown RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 ENOX2Q16206 610 aaKnown RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 NFIL3Q16649 462 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 DPCR1Q3MIW9 517 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 XKR4Q5GH76 650 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 ANKRD40Q6AI12 368 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 ARMCX5Q6P1M9 558 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 TMEM174Q8WUU8 243 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 DHTKD1Q96HY7 919 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 FBXL18Q96ME1 805 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 ZFP42Q96MM3 310 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 GAD1Q99259 594 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 RAD9AQ99638 391 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 DUSP9Q99956 384 aaKnown RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 RSAD1Q9HA92 442 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 CGNQ9P2M7 1197 aaKnown RBP14.23□□□□□ -0.13
RAB5C-206ENST00000550406 HCSTQ9UBK5 93 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 PARP2Q9UGN5 583 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 GIT1Q9Y2X7 761 aa14.23□□□□□ -0.13
RAB5C-206ENST00000550406 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 ARL5CA6NH57 179 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 TBKBP1A7MCY6 615 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 PTGESO14684 152 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 B4GALT3O60512 393 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 KIF20AO95235 890 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 CXCL8P10145 99 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 CYP2J2P51589 502 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 PAN2Q504Q3 1202 aaKnown RBP14.22□□□□□ -0.13
RAB5C-206ENST00000550406 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 APBB1IPQ7Z5R6 666 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-206ENST00000550406 SLC9A9Q8IVB4 645 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 ZC3H3Q8IXZ2 948 aaKnown RBP14.22□□□□□ -0.13
RAB5C-206ENST00000550406 TMEM130Q8N3G9 435 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-206ENST00000550406 P2RX5Q93086 422 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 ZMAT2Q96NC0 199 aaKnown RBP14.22□□□□□ -0.13
RAB5C-206ENST00000550406 ACAP3Q96P50 834 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 TMEM117Q9H0C3 514 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 PLAGL2Q9UPG8 496 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 CTNND2Q9UQB3 1225 aa14.22□□□□□ -0.13
RAB5C-206ENST00000550406 TTC26A0AVF1 554 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 LACTBL1A8MY62 500 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 TLL1O43897 1013 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 EXTL3O43909 919 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 NR3C1P04150 777 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 CLTAP09496 248 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 MLH1P40692 756 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 CASP4P49662 377 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 SCNN1GP51170 649 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 STX17P56962 302 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 NAB2Q15742 525 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 KLHL10Q6JEL2 608 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 TTI2Q6NXR4 508 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 SPRED2Q7Z698 418 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 GPD1LQ8N335 351 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 MLKLQ8NB16 471 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 NELFBQ8WX92 580 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 SNX27Q96L92 541 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 FAM213AQ9BRX8 229 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 ZBED2Q9BTP6 218 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 CCDC94Q9BW85 323 aaPredicted RBP14.21□□□□□ -0.13
RAB5C-206ENST00000550406 CWH43Q9H720 699 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 UBN1Q9NPG3 1134 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 TBC1D13Q9NVG8 400 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
RAB5C-206ENST00000550406 INPP5FQ9Y2H2 1132 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 INSL6Q9Y581 213 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 PCDHA11Q9Y5I1 949 aa14.21□□□□□ -0.13
RAB5C-206ENST00000550406 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
RAB5C-206ENST00000550406 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-206ENST00000550406 KIAA0391O15091 583 aaKnown RBP14.2□□□□□ -0.14
RAB5C-206ENST00000550406 HOXA2O43364 376 aa14.2□□□□□ -0.14
RAB5C-206ENST00000550406 CALUO43852 315 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-206ENST00000550406 DDHD2O94830 711 aa14.2□□□□□ -0.14
RAB5C-206ENST00000550406 LDHAP00338 332 aaKnown RBP14.2□□□□□ -0.14
RAB5C-206ENST00000550406 POMCP01189 267 aa14.2□□□□□ -0.14
RAB5C-206ENST00000550406 PPP1R2P41236 205 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms