RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 RXFP1Q9HBX9 757 aa26.56■■□□□ 1.84
USP44-205ENST00000549639 KMT5AQ9NQR1 393 aa26.56■■□□□ 1.84
USP44-205ENST00000549639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.56■■□□□ 1.84
USP44-205ENST00000549639 CHST7Q9NS84 486 aa26.56■■□□□ 1.84
USP44-205ENST00000549639 ARHGAP28Q9P2N2 729 aa26.56■■□□□ 1.84
USP44-205ENST00000549639 RECQL4O94761 1208 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 EDN1P05305 212 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 CREMQ03060 361 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 HSP90AA2PQ14568 343 aaPredicted RBP26.55■■□□□ 1.84
USP44-205ENST00000549639 ZRSR1Q15695 479 aaKnown RBP26.55■■□□□ 1.84
USP44-205ENST00000549639 USP41Q3LFD5 358 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 RARS2Q5T160 578 aaKnown RBP26.55■■□□□ 1.84
USP44-205ENST00000549639 NT5DC1Q5TFE4 455 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 EEF1DP3Q658K8 133 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 FUT10Q6P4F1 479 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 KCNK18Q7Z418 384 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 PNMA5Q96PV4 448 aa26.55■■□□□ 1.84
USP44-205ENST00000549639 NTPCRQ9BSD7 190 aaKnown RBP26.55■■□□□ 1.84
USP44-205ENST00000549639 MRPL4Q9BYD3 311 aaKnown RBP26.55■■□□□ 1.84
USP44-205ENST00000549639 C2CD2LO14523 706 aa26.54■■□□□ 1.84
USP44-205ENST00000549639 TADA2AO75478 443 aa26.54■■□□□ 1.84
USP44-205ENST00000549639 MAPK7Q13164 816 aa26.54■■□□□ 1.84
USP44-205ENST00000549639 TAS1R1Q7RTX1 841 aa26.54■■□□□ 1.84
USP44-205ENST00000549639 SPIRE2Q8WWL2 714 aa26.54■■□□□ 1.84
USP44-205ENST00000549639 SPDYE4A6NLX3 237 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 PTGESO14684 152 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 SMTNP53814 917 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 CALML4Q96GE6 196 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 ACO2Q99798 780 aaKnown RBP26.53■■□□□ 1.84
USP44-205ENST00000549639 BACH2Q9BYV9 841 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 POMKQ9H5K3 350 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 USP20Q9Y2K6 914 aa26.53■■□□□ 1.84
USP44-205ENST00000549639 SF3B1O75533 1304 aaKnown RBP eCLIP26.53■■□□□ 1.84
USP44-205ENST00000549639 TEX28O15482 410 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 LONP1P36776 959 aaKnown RBP26.52■■□□□ 1.84
USP44-205ENST00000549639 UBA7P41226 1012 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 ELAVL2Q12926 359 aaKnown RBP26.52■■□□□ 1.84
USP44-205ENST00000549639 TMEM119Q4V9L6 283 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 C15orf39Q6ZRI6 1047 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 C12orf76Q8N812 135 aaPredicted RBP26.52■■□□□ 1.84
USP44-205ENST00000549639 HDAC7Q8WUI4 952 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 GPR62Q9BZJ7 368 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 FNIP2Q9P278 1114 aa26.52■■□□□ 1.84
USP44-205ENST00000549639 F8W810 466 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 GLUD1P00367 558 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 PLA2G4BP0C869 781 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 PLS3P13797 630 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 SLC12A3P55017 1021 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 CYP26C1Q6V0L0 522 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 GPR149Q86SP6 731 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 CMASQ8NFW8 434 aaPredicted RBP26.51■■□□□ 1.83
USP44-205ENST00000549639 INTS4Q96HW7 963 aaKnown RBP26.51■■□□□ 1.83
USP44-205ENST00000549639 CCDC94Q9BW85 323 aaPredicted RBP26.51■■□□□ 1.83
USP44-205ENST00000549639 PTPRHQ9HD43 1115 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 TOPORSQ9NS56 1045 aaPredicted RBP26.51■■□□□ 1.83
USP44-205ENST00000549639 USTQ9Y2C2 406 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 GDAQ9Y2T3 454 aa26.51■■□□□ 1.83
USP44-205ENST00000549639 H0YCG3 227 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 SCP2P22307 547 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 GRM5P41594 1212 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 YARSP54577 528 aaKnown RBP26.5■■□□□ 1.83
USP44-205ENST00000549639 ZXDAP98168 799 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 STRN3Q13033 797 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 NAB2Q15742 525 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 UROC1Q96N76 676 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 RHOBTB2Q9BYZ6 727 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 LARSQ9P2J5 1176 aaKnown RBP26.5■■□□□ 1.83
USP44-205ENST00000549639 RAPGEFL1Q9UHV5 662 aa26.5■■□□□ 1.83
USP44-205ENST00000549639 VPS37CA5D8V6 355 aaPredicted RBP26.49■■□□□ 1.83
USP44-205ENST00000549639 MCF2P10911 925 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 ZNF568Q3ZCX4 644 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 PDXDC1Q6P996 788 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 TMC5Q6UXY8 1006 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 TRIM67Q6ZTA4 783 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 TAS1R3Q7RTX0 852 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 PLCD3Q8N3E9 789 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 PLIN2Q99541 437 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 CDT1Q9H211 546 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 PLEKHA4Q9H4M7 779 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 TSHZ2Q9NRE2 1034 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 ODF2LQ9ULJ1 636 aa26.49■■□□□ 1.83
USP44-205ENST00000549639 CASTOR2A6NHX0 329 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 SFI1A8K8P3 1242 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 SLC16A4O15374 487 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 BRD1O95696 1058 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 PROZP22891 400 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 SF3A1Q15459 793 aaKnown RBP26.48■■□□□ 1.83
USP44-205ENST00000549639 PTPN21Q16825 1174 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 BMP8AQ7Z5Y6 402 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 RIN2Q8WYP3 895 aaPredicted RBP26.48■■□□□ 1.83
USP44-205ENST00000549639 KCNN1Q92952 543 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 MFSD14AQ96MC6 490 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 PPP1R10Q96QC0 940 aaKnown RBP26.48■■□□□ 1.83
USP44-205ENST00000549639 PAAF1Q9BRP4 392 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 TCHPQ9BT92 498 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 TARS2Q9BW92 718 aaKnown RBP26.48■■□□□ 1.83
USP44-205ENST00000549639 MAN1C1Q9NR34 630 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 CDH22Q9UJ99 828 aa26.48■■□□□ 1.83
USP44-205ENST00000549639 TRIOO75962 3097 aa26.47■■□□□ 1.83
USP44-205ENST00000549639 TMEM189-UBE2V1I3L0A0 370 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms