RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 HRO43593 1189 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 GAS7O60861 476 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 ECI2O75521 394 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 C8AP07357 584 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 ITGA4P13612 1032 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 FCARP24071 287 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 DNM2P50570 870 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 LIMK1P53667 647 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 NRLP54845 237 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 SRSF5Q13243 272 aaKnown RBP13.01□□□□□ -0.33
USP15-215ENST00000549523 RTN1Q16799 776 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 SLC5A9Q2M3M2 681 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
USP15-215ENST00000549523 PAAF1Q9BRP4 392 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 LSG1Q9H089 658 aaKnown RBP13.01□□□□□ -0.33
USP15-215ENST00000549523 RXFP3Q9NSD7 469 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
USP15-215ENST00000549523 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
USP15-215ENST00000549523 BPTFQ12830 3046 aa13□□□□□ -0.33
USP15-215ENST00000549523 GREB1Q4ZG55 1949 aa13□□□□□ -0.33
USP15-215ENST00000549523 NCAM2O15394 837 aa13□□□□□ -0.33
USP15-215ENST00000549523 TSPAN1O60635 241 aa13□□□□□ -0.33
USP15-215ENST00000549523 HOXC13P31276 330 aa13□□□□□ -0.33
USP15-215ENST00000549523 SATB1Q01826 763 aa13□□□□□ -0.33
USP15-215ENST00000549523 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
USP15-215ENST00000549523 SRGAP1Q7Z6B7 1085 aa13□□□□□ -0.33
USP15-215ENST00000549523 RDM1Q8NG50 284 aa13□□□□□ -0.33
USP15-215ENST00000549523 LNX1Q8TBB1 728 aaPredicted RBP13□□□□□ -0.33
USP15-215ENST00000549523 PRPF31Q8WWY3 499 aaKnown RBP13□□□□□ -0.33
USP15-215ENST00000549523 ING5Q8WYH8 240 aa13□□□□□ -0.33
USP15-215ENST00000549523 COLEC11Q9BWP8 271 aa13□□□□□ -0.33
USP15-215ENST00000549523 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
USP15-215ENST00000549523 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
USP15-215ENST00000549523 KCNH3Q9ULD8 1083 aa13□□□□□ -0.33
USP15-215ENST00000549523 LHX6Q9UPM6 363 aa13□□□□□ -0.33
USP15-215ENST00000549523 NPEPPSP55786 919 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 CREMQ03060 361 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 RING1Q06587 406 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 AMHR2Q16671 573 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 TANGO2Q6ICL3 276 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 CNNM3Q8NE01 707 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 DNASE1L2Q92874 299 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 TMEM143Q96AN5 459 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 TCEANC2Q96MN5 208 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 NXF3Q9H4D5 531 aaKnown RBP12.99□□□□□ -0.33
USP15-215ENST00000549523 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
USP15-215ENST00000549523 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
USP15-215ENST00000549523 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
USP15-215ENST00000549523 TMEM8BA6NDV4 472 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 K7ESF4 209 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 ZBTB43O43298 467 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 SIM2Q14190 667 aaPredicted RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 IER2Q9BTL4 223 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 C2orf42Q9NWW7 574 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 WASF3Q9UPY6 502 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 MRPS17Q9Y2R5 130 aaKnown RBP12.98□□□□□ -0.33
USP15-215ENST00000549523 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
USP15-215ENST00000549523 SDK1Q7Z5N4 2213 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 NAV2Q8IVL1 2488 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 NCANO14594 1321 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.332e-6■■■■■ 57.1
USP15-215ENST00000549523 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 CHURC1-FNTBB4DL54 471 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 EML1O00423 815 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 XYLBO75191 536 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 KIF4AO95239 1232 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 CHRNB1P11230 501 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 CEBPBP17676 345 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 AKAP5P24588 427 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
USP15-215ENST00000549523 FNTBP49356 437 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 CCR3P51677 355 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 GRM2Q14416 872 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
USP15-215ENST00000549523 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 PSMD5Q16401 504 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 Q4G0T1 1027 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 AASDHQ4L235 1098 aaPredicted RBP12.97□□□□□ -0.33
USP15-215ENST00000549523 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
USP15-215ENST00000549523 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
USP15-215ENST00000549523 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
USP15-215ENST00000549523 ETNPPLQ8TBG4 499 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms