RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 RXFP1Q9HBX9 757 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 KMT5AQ9NQR1 393 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 ADAM28Q9UKQ2 775 aa20.52■□□□□ 0.88
CHMP1A-207ENST00000549328 PTGESO14684 152 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 C1RP00736 705 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 ADH1AP07327 375 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 USP41Q3LFD5 358 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 ATAT1Q5SQI0 421 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 KIAA1841Q6NSI8 718 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 FUT10Q6P4F1 479 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 EDAQ92838 391 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 FBXL18Q96ME1 805 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 NR2E1Q9Y466 385 aa20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 ARIH1Q9Y4X5 557 aaPredicted RBP20.51■□□□□ 0.87
CHMP1A-207ENST00000549328 F8W810 466 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 C2CD2LO14523 706 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 TADA2AO75478 443 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 SLC12A3P55017 1021 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 HSP90AA2PQ14568 343 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 TMEM119Q4V9L6 283 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 RARS2Q5T160 578 aaKnown RBP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 C12orf76Q8N812 135 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 SPIRE2Q8WWL2 714 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 ACO2Q99798 780 aaKnown RBP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 MRPL4Q9BYD3 311 aaKnown RBP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 GPR62Q9BZJ7 368 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 PTPRHQ9HD43 1115 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 DPP7Q9UHL4 492 aa20.5■□□□□ 0.87
CHMP1A-207ENST00000549328 TEX28O15482 410 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 PLA2G4BP0C869 781 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 LONP1P36776 959 aaKnown RBP20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 UBA7P41226 1012 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 NAB2Q15742 525 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 CALML4Q96GE6 196 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 INTS4Q96HW7 963 aaKnown RBP20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 PLIN2Q99541 437 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 POMKQ9H5K3 350 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 FNIP2Q9P278 1114 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 GDAQ9Y2T3 454 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 HCN4Q9Y3Q4 1203 aa20.49■□□□□ 0.87
CHMP1A-207ENST00000549328 SFI1A8K8P3 1242 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 PLS3P13797 630 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 SMTNP53814 917 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 ELMSAN1Q6PJG2 1045 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 TAS1R3Q7RTX0 852 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 GPR149Q86SP6 731 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 PAAF1Q9BRP4 392 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 RAPGEFL1Q9UHV5 662 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 CDH22Q9UJ99 828 aa20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 SF3B1O75533 1304 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHMP1A-207ENST00000549328 VPS37CA5D8V6 355 aaPredicted RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CASTOR2A6NHX0 329 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 SLC16A4O15374 487 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 GRM5P41594 1212 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CREMQ03060 361 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 SF3A1Q15459 793 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 TMC5Q6UXY8 1006 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 C15orf39Q6ZRI6 1047 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CMASQ8NFW8 434 aaPredicted RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 HDAC7Q8WUI4 952 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 RABGGTAQ92696 567 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CCDC94Q9BW85 323 aaPredicted RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 TARS2Q9BW92 718 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CDT1Q9H211 546 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 TOPORSQ9NS56 1045 aaPredicted RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 LARSQ9P2J5 1176 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 USTQ9Y2C2 406 aa20.47■□□□□ 0.87
CHMP1A-207ENST00000549328 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 BRD1O95696 1058 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 GLUD1P00367 558 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 MCF2P10911 925 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 PROZP22891 400 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 YARSP54577 528 aaKnown RBP20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 ZXDAP98168 799 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 ELAVL2Q12926 359 aaKnown RBP20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 STRN3Q13033 797 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 ZNF568Q3ZCX4 644 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 ARSHQ5FYA8 562 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 KANK3Q6NY19 840 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 CYP26C1Q6V0L0 522 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 TMEM161BQ8NDZ6 487 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 RIN2Q8WYP3 895 aaPredicted RBP20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 KCNN1Q92952 543 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 PPP1R10Q96QC0 940 aaKnown RBP20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 RHOBTB2Q9BYZ6 727 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 CACNG4Q9UBN1 327 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 ODF2LQ9ULJ1 636 aa20.46■□□□□ 0.87
CHMP1A-207ENST00000549328 TRIOO75962 3097 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 H0YCG3 227 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 SYT1P21579 422 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 XKR4Q5GH76 650 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 MPZL3Q6UWV2 235 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 ALKAL1Q6UXT8 129 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms