RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KANSL3Q9P2N6 904 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 A0A087WZ62 844 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 SHISA7A6NL88 538 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 NCAM2O15394 837 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 GDF9O60383 454 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 ZMYND10O75800 440 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 CDKL5O76039 1030 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 PROS1P07225 676 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 FDPSP14324 419 aaKnown RBP13.6□□□□□ -0.23
DDX54-206ENST00000549271 MTAPQ13126 283 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 CSRP2Q16527 193 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 LPAL2Q16609 132 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 MTERF2Q49AM1 385 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 N4BP2L1Q5TBK1 243 aaPredicted RBP13.6□□□□□ -0.23
DDX54-206ENST00000549271 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 FAM193BQ96PV7 902 aaPredicted RBP13.6□□□□□ -0.23
DDX54-206ENST00000549271 KIF2CQ99661 725 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 FDXACB1Q9BRP7 624 aaPredicted RBP13.6□□□□□ -0.23
DDX54-206ENST00000549271 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 GJB4Q9NTQ9 266 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
DDX54-206ENST00000549271 RAB23Q9ULC3 237 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 GREB1Q4ZG55 1949 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
DDX54-206ENST00000549271 F5P12259 2224 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 POMCP01189 267 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 NRLP54845 237 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 PSMC5P62195 406 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 TPRG1Q6ZUI0 275 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 ANO5Q75V66 913 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
DDX54-206ENST00000549271 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 GPR65Q8IYL9 337 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 FGF13Q92913 245 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 FAM20AQ96MK3 541 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 FNIP2Q9P278 1114 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 SUCLA2Q9P2R7 463 aaPredicted RBP13.59□□□□□ -0.23
DDX54-206ENST00000549271 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
DDX54-206ENST00000549271 PRG3Q9Y2Y8 225 aaPredicted RBP13.59□□□□□ -0.23
DDX54-206ENST00000549271 LAMA1P25391 3075 aa13.59□□□□□ -0.23
DDX54-206ENST00000549271 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 DKC1O60832 514 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX54-206ENST00000549271 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.24
DDX54-206ENST00000549271 NTHL1P78549 312 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 ADCY1Q08828 1119 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 KXD1Q9BQD3 176 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 KCNMB3Q9NPA1 279 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX54-206ENST00000549271 AGPAT5Q9NUQ2 364 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.24
DDX54-206ENST00000549271 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
DDX54-206ENST00000549271 COL4A2P08572 1712 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 F8W810 466 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 EML1O00423 815 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 TM4SF5O14894 197 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 TBX3O15119 743 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 SLC37A4O43826 429 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
DDX54-206ENST00000549271 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
DDX54-206ENST00000549271 DSC1Q08554 894 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 ZNF852Q6ZMS4 543 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 RHPN2Q8IUC4 686 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
DDX54-206ENST00000549271 CHRDQ9H2X0 955 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 IFT122Q9HBG6 1241 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 MRPS17Q9Y2R5 130 aaKnown RBP13.57□□□□□ -0.24
DDX54-206ENST00000549271 IGF2RP11717 2491 aa13.57□□□□□ -0.24
DDX54-206ENST00000549271 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
DDX54-206ENST00000549271 WDFY3Q8IZQ1 3526 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 DSPP15924 2871 aaKnown RBP13.56□□□□□ -0.24
DDX54-206ENST00000549271 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
DDX54-206ENST00000549271 KCNA4P22459 653 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 OR1G1P47890 313 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 LIMK1P53667 647 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 INF2Q27J81 1249 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 PRR23BQ6ZRT6 265 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 SRGAP1Q7Z6B7 1085 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 SLC7A3Q8WY07 619 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 B3GALT6Q96L58 329 aa13.56□□□□□ -0.24
DDX54-206ENST00000549271 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms