RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 FOXP2O15409 715 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 AKAP10O43572 662 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 KDM1AO60341 852 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 H2AFYO75367 372 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 FBXO21O94952 628 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 SCGB1D2O95969 90 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 IGKV5-2P06315 115 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 MYBL2P10244 700 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 SDHAP31040 664 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 LSP1P33241 339 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 GJA4P35212 333 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 IL12RB1P42701 662 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 RFX5P48382 616 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 EPHB1P54762 984 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 SCAND1P57086 179 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 INHBEP58166 350 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 NANOS3P60323 173 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PRR5P85299 388 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 KLF1Q13351 362 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PIN1Q13526 163 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 LRRC32Q14392 662 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PCBP2Q15366 365 aaKnown RBP eCLIP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 TAF7Q15545 349 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 NFE2Q16621 373 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PTPN21Q16825 1174 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PAN2Q504Q3 1202 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 GPR158Q5T848 1215 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 EP400NLQ6ZTU2 488 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 RTN4RL1Q86UN2 441 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ZBTB46Q86UZ6 589 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 GLCCI1Q86VQ1 547 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 RASSF3Q86WH2 238 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 PASD1Q8IV76 773 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ZNF610Q8N9Z0 462 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 TTLL11Q8NHH1 800 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 SSH3Q8TE77 659 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ASB15Q8WXK1 588 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 RTF1Q92541 710 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 IP6K1Q92551 441 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 FOXRED1Q96CU9 486 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 HOOK2Q96ED9 719 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 TSPAN17Q96FV3 270 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ZNF496Q96IT1 587 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ZDHHC5Q9C0B5 715 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 LSG1Q9H089 658 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ACSS2Q9NR19 701 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 RBPJLQ9UBG7 517 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 STAP2Q9UGK3 403 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 DBR1Q9UK59 544 aaKnown RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 NUDT5Q9UKK9 219 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 USP16Q9Y5T5 823 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 TTC21AQ8NDW8 1320 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ADAMTSL3P82987 1691 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 ADAMTS7Q9UKP4 1686 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 FLT4P35916 1363 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 MAP3K5Q99683 1374 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 IBTKQ9P2D0 1353 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 KDM6AO15550 1401 aaPredicted RBP2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 NCAPD2Q15021 1401 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 XIRP1Q702N8 1843 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PI4KAP2A4QPH2 592 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 OR14I1A6ND48 311 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TSPAN6O43657 245 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHGA12O60330 932 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 LRG1P02750 347 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CYP17A1P05093 508 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 MPOP05164 745 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CLEC2LP0C7M8 214 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FAHP16930 419 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 AOAHP28039 575 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 MC4RP32245 332 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 STAT5AP42229 794 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 GPR3P46089 330 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 MAPKAPK2P49137 400 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FNTBP49356 437 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CALD1Q05682 793 aaKnown RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CUL4AQ13619 759 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 BECN1Q14457 450 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 ODF1Q14990 250 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 NR1I3Q14994 352 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 EPHA7Q15375 998 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 ZBTB41Q5SVQ8 909 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CLEC17AQ6ZS10 378 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 USP51Q70EK9 711 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 RUFY3Q7L099 469 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 ARHGEF25Q86VW2 580 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PROSER1Q86XN7 944 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 MIB1Q86YT6 1006 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 HSCBQ8IWL3 235 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TRIM48Q8IWZ4 208 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FAM126BQ8IXS8 530 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 FAM26EQ8N5C1 309 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 PI4KAP1Q8N8J0 262 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 C1orf162Q8NEQ5 155 aaPredicted RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 TGFBRAP1Q8WUH2 860 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 LMBR1Q8WVP7 490 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 ERCC4Q92889 916 aaPredicted RBP2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 RILPL2Q969X0 211 aa2.84□□□□□ -1.95
DEPDC4-206ENST00000549100 CHMP4CQ96CF2 233 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms