RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 SREK1Q8WXA9 508 aaKnown RBP6.37□□□□□ -1.39
CNOT2-215ENST00000548863 ANO3Q9BYT9 981 aa6.37□□□□□ -1.39
CNOT2-215ENST00000548863 CXCR5P32302 372 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 FLT3LGP49771 235 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 C16orf86Q6ZW13 317 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 RASSF3Q86WH2 238 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 ASB10Q8WXI3 467 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 CEP95Q96GE4 821 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 RNPC3Q96LT9 517 aaKnown RBP6.36□□□□□ -1.39
CNOT2-215ENST00000548863 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
CNOT2-215ENST00000548863 NEU1Q99519 415 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 MS4A5Q9H3V2 200 aa6.36□□□□□ -1.39
CNOT2-215ENST00000548863 USP15Q9Y4E8 981 aaPredicted RBP6.36□□□□□ -1.39
CNOT2-215ENST00000548863 SPATA31A6Q5VVP1 1343 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 UNC119BA6NIH7 251 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 ADCYAP1R1P41586 468 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 MXRA7P84157 204 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 SCAPQ12770 1279 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 RESTQ13127 1097 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 MPP3Q13368 585 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 SEPT7Q16181 437 aaKnown RBP6.35□□□□□ -1.39
CNOT2-215ENST00000548863 FAM47AQ5JRC9 791 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 PITRM1Q5JRX3 1037 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 NPM2Q86SE8 214 aaKnown RBP6.35□□□□□ -1.39
CNOT2-215ENST00000548863 C11orf74Q86VG3 221 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 OR2W6PQ8NHA6 318 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 MDM1Q8TC05 714 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 PRDM12Q9H4Q4 367 aa6.35□□□□□ -1.39
CNOT2-215ENST00000548863 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNOT2-215ENST00000548863 RPTORQ8N122 1335 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 KDM1AO60341 852 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 PHF2O75151 1096 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 FKBP9O95302 570 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 CDK4P11802 303 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 MFSD14BQ5SR56 506 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 PRAMEF14Q5SWL7 426 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 BROXQ5VW32 411 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 CNNM4Q6P4Q7 775 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 FKBP9P1Q75LS8 142 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 RHOT2Q8IXI1 618 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 NIM1KQ8IY84 436 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 CAGE1Q8TC20 777 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 ZNF480Q8WV37 535 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 EMC7Q9NPA0 242 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 RNF181Q9P0P0 153 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 ATP11BQ9Y2G3 1177 aa6.34□□□□□ -1.39
CNOT2-215ENST00000548863 RAB11FIP3O75154 756 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 CDKL5O76039 1030 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 FOSP01100 380 aaPredicted RBP6.33□□□□□ -1.4
CNOT2-215ENST00000548863 CLRN1P58418 232 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 SLC5A5Q92911 643 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 NAF1Q96HR8 494 aaKnown RBP6.33□□□□□ -1.4
CNOT2-215ENST00000548863 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 TARS2Q9BW92 718 aaKnown RBP6.33□□□□□ -1.4
CNOT2-215ENST00000548863 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
CNOT2-215ENST00000548863 FDXRP22570 491 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 CHN2P52757 468 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 LGALS4P56470 323 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 NHLH1Q02575 133 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 MST1LQ2TV78 715 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 CCDC144BQ3MJ40 725 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 GJC2Q5T442 439 aaPredicted RBP6.32□□□□□ -1.4
CNOT2-215ENST00000548863 BOLLQ8N9W6 283 aaKnown RBP6.32□□□□□ -1.4
CNOT2-215ENST00000548863 SLC35B2Q8TB61 432 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 APPBP2Q92624 585 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 KCTD10Q9H3F6 313 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 TMEM74BQ9NUR3 256 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 PLAAQ9Y263 795 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 MAP3K2Q9Y2U5 619 aa6.32□□□□□ -1.4
CNOT2-215ENST00000548863 C1RP00736 705 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 SNRPA1P09661 255 aaKnown RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 ITGAMP11215 1152 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 IL2P60568 153 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 ZNF362Q5T0B9 420 aaPredicted RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 TMEM132CQ8N3T6 1108 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 KLHL11Q9NVR0 708 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
CNOT2-215ENST00000548863 NOC2LQ9Y3T9 749 aaKnown RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 SETD1BQ9UPS6 1966 aaKnown RBP6.31□□□□□ -1.4
CNOT2-215ENST00000548863 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 ELANEP08246 267 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 PTH2RP49190 550 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 ZNF169Q14929 603 aaPredicted RBP6.3□□□□□ -1.4
CNOT2-215ENST00000548863 SPDYE7PQ495Y7 208 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 B3GNTL1Q67FW5 361 aaPredicted RBP6.3□□□□□ -1.4
CNOT2-215ENST00000548863 GPR149Q86SP6 731 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 OR56A1Q8NGH5 318 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 BOD1Q96IK1 185 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 RSAD1Q9HA92 442 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 ATRNL1Q5VV63 1379 aa6.3□□□□□ -1.4
CNOT2-215ENST00000548863 CXorf49A8MYA2 514 aaPredicted RBP6.29□□□□□ -1.4
CNOT2-215ENST00000548863 RARRES1P49788 294 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms