RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LILRA6Q6PI73 481 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 DCLRE1AQ6PJP8 1040 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 NECAB1Q8N987 351 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 NAP1L4Q99733 375 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 FOXQ1Q9C009 403 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 CXCL16Q9H2A7 254 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 TTC12Q9H892 705 aaPredicted RBP13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 NUMBLQ9Y6R0 609 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 WNT7AO00755 349 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 CCL16O15467 120 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 EPB41L2O43491 1005 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 ZMYND10O75800 440 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 DGAT1O75907 488 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 LMNAP02545 664 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 KRT2P35908 639 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 RARRES1P49788 294 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 GPC5P78333 572 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 FOXK2Q01167 660 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 SNW1Q13573 536 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 FGF14Q92915 247 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 ARHGEF3Q9NR81 526 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 ANKEF1Q9NU02 776 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 SNTG2Q9NY99 539 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
TRAFD1-205ENST00000548277 A0A1B0GUA9 196 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 POTEMA6NI47 508 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 PFKFB2O60825 505 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 GRIK3Q13003 919 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 HTR4Q13639 388 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 HSP90AA2PQ14568 343 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 PPM1LQ5SGD2 360 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 NOSTRINQ8IVI9 506 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 HDAC7Q8WUI4 952 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 NXPE3Q969Y0 559 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 CLSTN3Q9BQT9 956 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 ZDHHC7Q9NXF8 308 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 VPS13AQ96RL7 3174 aa13.24□□□□□ -0.29
TRAFD1-205ENST00000548277 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 ADAM12O43184 909 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 KIF4AO95239 1232 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 SP9P0CG40 484 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 GLULP15104 373 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 CD72P21854 359 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 IGFBP6P24592 240 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 PSMD5Q16401 504 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 LIN9Q5TKA1 542 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 TTPALQ9BTX7 342 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 GDAQ9Y2T3 454 aa13.23□□□□□ -0.29
TRAFD1-205ENST00000548277 CITO14578 2027 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 MYH11P35749 1972 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 THP07101 528 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 C8AP07357 584 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 TUSC3Q13454 348 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 UBXN2BQ14CS0 331 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 LNX1Q8TBB1 728 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 ING5Q8WYH8 240 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 WASF1Q92558 559 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 TNFRSF25Q93038 417 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 RMDN1Q96DB5 314 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 TMEM60Q9H2L4 133 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 DLGAP2Q9P1A6 1054 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 CDH7Q9ULB5 785 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 MTF2Q9Y483 593 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 PATJQ8NI35 1801 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
TRAFD1-205ENST00000548277 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PTGESO14684 152 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 NEMFO60524 1076 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 MED24O75448 989 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 LYPLA2O95372 231 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms