RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PALB2Q86YC2 1186 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 DAW1Q8N136 415 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 KCNH6Q9H252 994 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 ADAM28Q9UKQ2 775 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 USTQ9Y2C2 406 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 ZMYM2Q9UBW7 1377 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 CCDC195A0A1B0GUA6 201 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 TGM5O43548 720 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 RFPL2O75678 378 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 ADH1AP07327 375 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 PRPHP41219 470 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 NPTX2P47972 431 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 EFNA5P52803 228 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 MTMR3Q13615 1198 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 PPP2R5AQ15172 486 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 USP41Q3LFD5 358 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 RTP2Q5QGT7 225 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 MCTP1Q6DN14 999 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 LILRA6Q6PI73 481 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 PRSS55Q6UWB4 352 aaPredicted RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 DTHD1Q6ZMT9 781 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 C15orf39Q6ZRI6 1047 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 GLYCTKQ8IVS8 523 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 TDRD5Q8NAT2 981 aaKnown RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 PRSS33Q8NF86 280 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 CMASQ8NFW8 434 aaPredicted RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
CPSF6-204ENST00000547486 KIFAP3Q92845 792 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 IFT74Q96LB3 600 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 RUSC1Q9BVN2 902 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 SORCS3Q9UPU3 1222 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 DNM3Q9UQ16 869 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
CPSF6-204ENST00000547486 MUC6Q6W4X9 2439 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 K7ERI5 159 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 LAD1O00515 517 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 ST18O60284 1047 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 N4BP1O75113 896 aaKnown RBP14.7□□□□□ -0.06
CPSF6-204ENST00000547486 HIP1RO75146 1068 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 KIF4AO95239 1232 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 GLUD1P00367 558 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 THP07101 528 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 PEX3P56589 373 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 MAPK7Q13164 816 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 ATF7IP2Q5U623 682 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 KRT79Q5XKE5 535 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 C1orf186Q6ZWK4 172 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 TAS1R3Q7RTX0 852 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 ALYREFQ86V81 257 aaKnown RBP14.7□□□□□ -0.06
CPSF6-204ENST00000547486 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
CPSF6-204ENST00000547486 UBALD2Q8IYN6 164 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 ZNF707Q96C28 371 aaPredicted RBP14.7□□□□□ -0.06
CPSF6-204ENST00000547486 ADPGKQ9BRR6 497 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 FNIP2Q9P278 1114 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 STK24Q9Y6E0 443 aa14.7□□□□□ -0.06
CPSF6-204ENST00000547486 CCDC169A6NNP5 214 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 SFI1A8K8P3 1242 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 GJB2P29033 226 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 ATP2C1P98194 919 aaPredicted RBP14.69□□□□□ -0.06
CPSF6-204ENST00000547486 CD300LGQ6UXG3 332 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 CCDC149Q6ZUS6 474 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 GPR65Q8IYL9 337 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 PLIN2Q99541 437 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 CLSTN3Q9BQT9 956 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 PTPRHQ9HD43 1115 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 TNFSF13BQ9Y275 285 aa14.69□□□□□ -0.06
CPSF6-204ENST00000547486 ZNF318Q5VUA4 2279 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 PAPLNO95428 1278 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 AVPR2P30518 371 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 TCF15Q12870 199 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 ZRSR1Q15695 479 aaKnown RBP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 DCAF4L1Q3SXM0 396 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 GLRA4Q5JXX5 417 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 OTOP3Q7RTS5 596 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 CEP120Q8N960 986 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 LNX1Q8TBB1 728 aaPredicted RBP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 PHOX2BQ99453 314 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 ACO2Q99798 780 aaKnown RBP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 NT5C3AQ9H0P0 336 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 TMEM134Q9H6X4 195 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 WDR6Q9NNW5 1121 aaKnown RBP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.68□□□□□ -0.06
CPSF6-204ENST00000547486 ARHGAP28Q9P2N2 729 aa14.68□□□□□ -0.06
CPSF6-204ENST00000547486 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.06
CPSF6-204ENST00000547486 ABLIM1O14639 778 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 ADAM12O43184 909 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 C1RP00736 705 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 OSTNP61366 133 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms