RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 TMEM40Q8WWA1 233 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 SUSD6Q92537 303 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 NECTIN4Q96NY8 510 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 GSDMAQ96QA5 445 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 OSMRQ99650 979 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 SEL1LQ9UBV2 794 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 NR2E1Q9Y466 385 aa13.26□□□□□ -0.29
HDAC7-226ENST00000547259 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 K7ENM7 598 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 FSCN2O14926 492 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 PER2O15055 1255 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 ASAP2O43150 1006 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 MGEA5O60502 916 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 GPR32O75388 356 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 SRGAP2CP0DJJ0 459 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 NAMPTP43490 491 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 GATMP50440 423 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 SMTNP53814 917 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 ERVFC1P60507 584 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 KCNB1Q14721 858 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 CES5AQ6NT32 575 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 KCNT2Q6UVM3 1135 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 KSR1Q8IVT5 923 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 DEPTORQ8TB45 409 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 CASP10Q92851 521 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 ZNF668Q96K58 619 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-226ENST00000547259 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 MRPL9Q9BYD2 267 aaKnown RBP13.25□□□□□ -0.29
HDAC7-226ENST00000547259 CWH43Q9H720 699 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 MRPL44Q9H9J2 332 aaKnown RBP13.25□□□□□ -0.29
HDAC7-226ENST00000547259 CDHR5Q9HBB8 845 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 KMT5AQ9NQR1 393 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
HDAC7-226ENST00000547259 RBAK-RBAKDNI3L0D1 243 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 BIN1O00499 593 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 RHOBTB3O94955 611 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 SKIP12755 728 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 PHKA2P46019 1235 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 NPTX2P47972 431 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 GPC3P51654 580 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 NCKAP1LP55160 1127 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 NLRP11P59045 1033 aaKnown RBP13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ITIH3Q06033 890 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 DSC3Q14574 896 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 NT5DC1Q5TFE4 455 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 RBM43Q6ZSC3 357 aaKnown RBP13.24□□□□□ -0.29
HDAC7-226ENST00000547259 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 RNF149Q8NC42 400 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 HPS3Q969F9 1004 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 KIFC3Q9BVG8 833 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-226ENST00000547259 C2orf40Q9H1Z8 148 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 OLFML3Q9NRN5 406 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 STK39Q9UEW8 545 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 MAN1B1Q9UKM7 699 aa13.24□□□□□ -0.29
HDAC7-226ENST00000547259 ZFHX2Q9C0A1 2572 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-226ENST00000547259 RIF1Q5UIP0 2472 aaKnown RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 A0A087WZ62 844 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 H0YCG3 227 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 SLC16A4O15374 487 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 LETM1O95202 739 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 GCNT3O95395 438 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 FGFR1P11362 822 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 ALDH7A1P49419 539 aaKnown RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 EHHADHQ08426 723 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 PSMD2Q13200 908 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 KCNC3Q14003 757 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 SMC1AQ14683 1233 aaKnown RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 PLPP4Q5VZY2 271 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 ISM2Q6H9L7 571 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 TRIML1Q8N9V2 468 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-226ENST00000547259 SLC39A2Q9NP94 309 aa13.23□□□□□ -0.29
HDAC7-226ENST00000547259 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
HDAC7-226ENST00000547259 A0A0U1RQF3 1178 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms