RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 GSTT1P30711 240 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SERPINB4P48594 390 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 TNIP1Q15025 636 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ZRSR2Q15696 482 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 KHDC1Q4VXA5 237 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SH3RF3Q8TEJ3 882 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 THAP2Q9H0W7 228 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 POLLQ9UGP5 575 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 PHTF1Q9UMS5 762 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ALG6Q9Y672 507 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 MAGEA13PA6NCF6 341 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 WTIPA6NIX2 430 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 COILP38432 576 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 SESTD1Q86VW0 696 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 CCNJLQ8IV13 435 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 KRT35Q92764 455 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 TIPINQ9BVW5 301 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 SPZ1Q9BXG8 430 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 SEPT11Q9NVA2 429 aaKnown RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 COG5Q9UP83 839 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 LAMB1P07942 1786 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 MIF4GDA9UHW6 222 aaKnown RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 E9PMD0 336 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 ECE2O60344 883 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 TJP3O95049 919 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 TSPY3P0CV98 308 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 TSPY8P0CW00 308 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 PTPN4P29074 926 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 KCNJ1P48048 391 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 OCRLQ01968 901 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 DNAJC3Q13217 504 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 RCN1Q15293 331 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 NSUN4Q96CB9 384 aaKnown RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 FAM84BQ96KN1 310 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-205ENST00000547068 MKNK2Q9HBH9 465 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
NPAS3-205ENST00000547068 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 ADGRA3Q8IWK6 1321 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TTC36A6NLP5 189 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TMEM110-MUSTN1A8MSY1 372 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 PDLIM1O00151 329 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TRAFD1O14545 582 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 GGPS1O95749 300 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TTC4O95801 387 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 SOX5P35711 763 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 PSMC4P43686 418 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MARCKSL1P49006 195 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MECOMQ03112 1051 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 KYNUQ16719 465 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 HHATQ5VTY9 493 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 C4orf50Q6ZRC1 276 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 C15orf52Q6ZUT6 534 aaKnown RBP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 SLC51AQ86UW1 340 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 OLIG1Q8TAK6 271 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 PTPRN2Q92932 1015 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 NDNQ99608 321 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 PDP2Q9P2J9 529 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 THAP12O43422 761 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MARCH6O60337 910 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 LGR5O75473 907 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 AKAP3O75969 853 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 ECEL1O95672 775 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 CHKAP35790 457 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MOGSQ13724 837 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 RASIP1Q5U651 963 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 RFWD3Q6PCD5 774 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 FBXO33Q7Z6M2 555 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 PPFIBP2Q8ND30 876 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 CFAP61Q8NHU2 1237 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 NRG4Q8WWG1 115 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 OPTNQ96CV9 577 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 DYNLL2Q96FJ2 89 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 VCX3AQ9NNX9 186 aa11.42□□□□□ -0.58
NPAS3-205ENST00000547068 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
NPAS3-205ENST00000547068 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms