RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 CTU1Q7Z7A3 348 aaKnown RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 GPC2Q8N158 579 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 TXNDC5Q8NBS9 432 aaKnown RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 ZNF669Q96BR6 464 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 FAM227BQ96M60 508 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 ANP32EQ9BTT0 268 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 GLIS2Q9BZE0 524 aaPredicted RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 SLC6A20Q9NP91 592 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 CHMP5Q9NZZ3 219 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 RBM8AQ9Y5S9 174 aaKnown RBP8.28□□□□□ -1.08
CHPT1-203ENST00000546873 DUSP10Q9Y6W6 482 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 MYH13Q9UKX3 1938 aa8.28□□□□□ -1.08
CHPT1-203ENST00000546873 DOCK2Q92608 1830 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 GNAT1P11488 350 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 IARSP41252 1262 aaKnown RBP8.27□□□□□ -1.09
CHPT1-203ENST00000546873 NEK4P51957 841 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 UBE4AQ14139 1066 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 DLK2Q6UY11 383 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 IFNL3Q8IZI9 196 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 IL17RAQ96F46 866 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 CROTQ9UKG9 612 aa8.27□□□□□ -1.09
CHPT1-203ENST00000546873 TRPM7Q96QT4 1865 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 FGFR2P21802 821 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 GRK2P25098 689 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 GRK3P35626 688 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 GPR85P60893 370 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 EFEMP1Q12805 493 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 MAP3K12Q12852 859 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 NOGQ13253 232 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ADAM9Q13443 819 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 GRAPQ13588 217 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 SLC17A8Q8NDX2 589 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 GRAPLQ8TC17 118 aaPredicted RBP8.26□□□□□ -1.09
CHPT1-203ENST00000546873 APPBP2Q92624 585 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 EDC3Q96F86 508 aaKnown RBP8.26□□□□□ -1.09
CHPT1-203ENST00000546873 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ZSWIM3Q96MP5 696 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 JAKMIP1Q96N16 626 aaKnown RBP8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ALG1Q9BT22 464 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ARHGEF4Q9NR80 690 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 RNF186Q9NXI6 227 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ASH2LQ9UBL3 628 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 FTSJ1Q9UET6 329 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 CTNNA3Q9UI47 895 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 ZNF536O15090 1300 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 MAST3O60307 1309 aa8.26□□□□□ -1.09
CHPT1-203ENST00000546873 MSCO60682 206 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 FRAT2O75474 233 aaPredicted RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 IDH1O75874 414 aaKnown RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 LRG1P02750 347 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 CASTP20810 708 aaKnown RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 MCAMP43121 646 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 PHKA1P46020 1223 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 RPS8P62241 208 aaKnown RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 SURF1Q15526 300 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 PRR31Q5SQ13 230 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 BLOC1S2Q6QNY1 142 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 USP50Q70EL3 339 aaPredicted RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 PLEKHH3Q7Z736 793 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 SPATA5Q8NB90 893 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 MAP4K1Q92918 833 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 OSBP2Q969R2 916 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 RBM17Q96I25 401 aaKnown RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 TM6SF1Q9BZW5 370 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 TMEM168Q9H0V1 697 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 TMX4Q9H1E5 349 aaPredicted RBP8.25□□□□□ -1.09
CHPT1-203ENST00000546873 IL25Q9H293 177 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 SNX14Q9Y5W7 946 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 LRRC37AA6NMS7 1700 aa8.25□□□□□ -1.09
CHPT1-203ENST00000546873 LAMA4Q16363 1823 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 RPAP1Q9BWH6 1393 aaPredicted RBP8.24□□□□□ -1.09
CHPT1-203ENST00000546873 FAM47E-STBD1D6RA91 191 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 SLC27A2O14975 620 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 TAF5LO75529 589 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 ITGB3P05106 788 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
CHPT1-203ENST00000546873 PTMSP20962 102 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 HUNKP57058 714 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 KIF23Q02241 960 aaPredicted RBP8.24□□□□□ -1.09
CHPT1-203ENST00000546873 PTH1RQ03431 593 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 RASGRF1Q13972 1273 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 UBE3CQ15386 1083 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 VASNQ6EMK4 673 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 TMED8Q6PL24 325 aaPredicted RBP8.24□□□□□ -1.09
CHPT1-203ENST00000546873 KCNT2Q6UVM3 1135 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 TMC5Q6UXY8 1006 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 OTOP3Q7RTS5 596 aa8.24□□□□□ -1.09
CHPT1-203ENST00000546873 ZNF589Q86UQ0 364 aaPredicted RBP8.24□□□□□ -1.09
CHPT1-203ENST00000546873 GBP4Q96PP9 640 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms