RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RIOX1Q9H6W3 641 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 HOMER3Q9NSC5 361 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
HOXC11-202ENST00000546378 DONSONQ9NYP3 566 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 TGFB1I1O43294 461 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
HOXC11-202ENST00000546378 LMNB1P20700 586 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 PLA2G4FQ68DD2 849 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 RSBN1LQ6PCB5 846 aaPredicted RBP15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ZNF662Q6ZS27 426 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 FITM2Q8N6M3 262 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 AGPAT1Q99943 283 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ENTPD5O75356 428 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 SPATA31C1P0DKV0 1188 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 CA4P22748 312 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 CTNNA2P26232 953 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 POLE2P56282 527 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 AUHQ13825 339 aaKnown RBP15.67■□□□□ 0.1
HOXC11-202ENST00000546378 PRAMEF18Q5VWM3 479 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 TAOK1Q7L7X3 1001 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 C11orf70Q9BRQ4 267 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 TMEM39BQ9GZU3 492 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 PI4KBQ9UBF8 816 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ANAPC5Q9UJX4 755 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ZNRF3Q9ULT6 936 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 KITP10721 976 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 MPP2Q14168 576 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 MKNK1Q9BUB5 465 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 SLITRK6Q9H5Y7 841 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 NPHS2Q9NP85 383 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 SUCLA2Q9P2R7 463 aaPredicted RBP15.67■□□□□ 0.1
HOXC11-202ENST00000546378 ZNF148Q9UQR1 794 aa15.67■□□□□ 0.1
HOXC11-202ENST00000546378 USP15Q9Y4E8 981 aaPredicted RBP15.67■□□□□ 0.1
HOXC11-202ENST00000546378 PIK3R2O00459 728 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 RIPK2O43353 540 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 NQO1P15559 274 aaKnown RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 MAPK4P31152 587 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SHMT1P34896 483 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 GSCP56915 257 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 PPP3CAQ08209 521 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 LRIG3Q6UXM1 1119 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SAMD7Q7Z3H4 446 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SPATA21Q7Z572 469 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SCYL3Q8IZE3 742 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 PARD3BQ8TEW8 1205 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SIX2Q9NPC8 291 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 R3HDM2Q9Y2K5 976 aaKnown RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 BZW2Q9Y6E2 419 aaKnown RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 HIP1RO75146 1068 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 CETN1Q12798 172 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 RCN2Q14257 317 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 CAPRIN2Q6IMN6 1127 aaKnown RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SPOPLQ6IQ16 392 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 APBB1IPQ7Z5R6 666 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 CBWD2Q8IUF1 395 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 TTC8Q8TAM2 541 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 SHCBP1LQ9BZQ2 653 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 APEX2Q9UBZ4 518 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 MARCOQ9UEW3 520 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-202ENST00000546378 PASKQ96RG2 1323 aa15.66■□□□□ 0.1
HOXC11-202ENST00000546378 ARP10275 920 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 ATF2P15336 505 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 PDE6CP51160 858 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 PTENP60484 403 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 DRP2Q13474 957 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 ZDHHC24Q6UX98 284 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 SH3BP5LQ7L8J4 393 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 PCDHB18PQ96TA0 734 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.65■□□□□ 0.1
HOXC11-202ENST00000546378 MYH1P12882 1939 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 MYH4Q9Y623 1939 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 CFAP69A5D8W1 941 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 AP1G2O75843 785 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 EPHB2P29323 1055 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 NRLP54845 237 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 PRKG1Q13976 671 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 C6orf118Q5T5N4 469 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 MREGQ8N565 214 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 IQCDQ96DY2 449 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
HOXC11-202ENST00000546378 AMNQ9BXJ7 453 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 NOP53Q9NZM5 478 aaKnown RBP15.65■□□□□ 0.1
HOXC11-202ENST00000546378 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
HOXC11-202ENST00000546378 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 EXOC1LA0A1B0GW35 172 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 E2F8A0AVK6 867 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 DDX3YO15523 660 aaKnown RBP15.65■□□□□ 0.1
HOXC11-202ENST00000546378 EGFRP00533 1210 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 BCRP11274 1271 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 NCALDP61601 193 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 CNGA2Q16280 664 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 NAP1L3Q99457 506 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms