RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 OPLAHO14841 1288 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 GAS8O95995 478 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 SHBGP04278 402 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 PMS2P54278 862 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 IFI35P80217 286 aaPredicted RBP10.46□□□□□ -0.73
TRAF1-203ENST00000546084 TMEM62Q0P6H9 643 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 KCNT1Q5JUK3 1230 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 CIAPIN1Q6FI81 312 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF720Q7Z2F6 126 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 SLC7A3Q8WY07 619 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 ANAPC5Q9UJX4 755 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 INTUQ9ULD6 942 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 TCRBV7S2A1N4TA0A589 114 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 H0Y3Z8 333 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 CCDC188H7C350 402 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 SCP2P22307 547 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 FNTAP49354 379 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 PPP4R3CPQ6ZMV5 832 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 CHMP6Q96FZ7 201 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 FAM114A2Q9NRY5 505 aa10.46□□□□□ -0.73
TRAF1-203ENST00000546084 STRCQ7RTU9 1775 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 ASTN1O14525 1302 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 E2F8A0AVK6 867 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 ANKRD63C9JTQ0 380 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 TGFB1I1O43294 461 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 ITGB5P18084 799 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 BASP1P80723 227 aaKnown RBP10.46□□□□□ -0.74
TRAF1-203ENST00000546084 LACTBP83111 547 aaPredicted RBP10.46□□□□□ -0.74
TRAF1-203ENST00000546084 BBS9Q3SYG4 887 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 CYP4A22Q5TCH4 519 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 INTS8Q75QN2 995 aaKnown RBP10.46□□□□□ -0.74
TRAF1-203ENST00000546084 JAMLQ86YT9 394 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 C4orf33Q8N1A6 199 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 MREGQ8N565 214 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 HSPH1Q92598 858 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 CCDC77Q9BR77 488 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 STK33Q9BYT3 514 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 POLR3FQ9H1D9 316 aaPredicted RBP10.46□□□□□ -0.74
TRAF1-203ENST00000546084 SAE1Q9UBE0 346 aaPredicted RBP10.46□□□□□ -0.74
TRAF1-203ENST00000546084 PKD1L3Q7Z443 1732 aa10.46□□□□□ -0.74
TRAF1-203ENST00000546084 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 DNM1LO00429 736 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 EGFRP00533 1210 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 TMEM191BP0C7N4 346 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 CHN1P15882 459 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 ELF1P32519 619 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SREBF1P36956 1147 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SCTRP47872 440 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 ATP13A4Q4VNC1 1196 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 LIN9Q5TKA1 542 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 LRIG3Q6UXM1 1119 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 FUKQ8N0W3 1084 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 RNF169Q8NCN4 708 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 PPP1R14CQ8TAE6 165 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 LNX1Q8TBB1 728 aaPredicted RBP10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SYN2Q92777 582 aaPredicted RBP10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SGSM3Q96HU1 749 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 OSBPL7Q9BZF2 842 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 KCTD10Q9H3F6 313 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 ERVK-5Q9HDB9 667 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 CTNNAL1Q9UBT7 734 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 LAMB4A4D0S4 1761 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 TRAPPC3O43617 180 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 KRT1P04264 644 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SAT1P21673 171 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 MXRA7P84157 204 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 KRT17Q04695 432 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 GABPAQ06546 454 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 EDRF1Q3B7T1 1238 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 CD302Q8IX05 232 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 ALG3Q92685 438 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 DDX23Q9BUQ8 820 aaKnown RBP10.45□□□□□ -0.74
TRAF1-203ENST00000546084 SAYSD1Q9NPB0 183 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 DCTN4Q9UJW0 460 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 BCL9LQ86UU0 1499 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 A0A1B0GUA9 196 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 NR3C2P08235 984 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 PYGMP11217 842 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 RRM1P23921 792 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 RWDD2BP57060 319 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 EPHA7Q15375 998 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 UGCGQ16739 394 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 IRF2BP2Q7Z5L9 587 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 ZC3H18Q86VM9 953 aaKnown RBP10.45□□□□□ -0.74
TRAF1-203ENST00000546084 PAF1Q8N7H5 531 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 CCDC89Q8N998 374 aa10.45□□□□□ -0.74
TRAF1-203ENST00000546084 IQCGQ9H095 443 aaKnown RBP10.45□□□□□ -0.74
TRAF1-203ENST00000546084 DUOX1Q9NRD9 1551 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 IRF6O14896 467 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 RXRBP28702 533 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 CCDC6Q16204 474 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 ANKRD20A8PQ5CZ79 823 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 PPP6R3Q5H9R7 873 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 YTHDF3Q7Z739 585 aaKnown RBP10.44□□□□□ -0.74
TRAF1-203ENST00000546084 RHPN2Q8IUC4 686 aa10.44□□□□□ -0.74
TRAF1-203ENST00000546084 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms