RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 CLUL1Q15846 466 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 MPZL3Q6UWV2 235 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 SV2BQ7L1I2 683 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 LINC00301Q8NCQ3 95 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 TMEM161BQ8NDZ6 487 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 BICD1Q96G01 975 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 TARS2Q9BW92 718 aaKnown RBP16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 XIRP2A4UGR9 3374 aa16.84■□□□□ 0.29
PTP4A1P2-201ENST00000546033 C2orf71A6NGG8 1288 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 K7ENM7 598 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 B4GALT3O60512 393 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MAPTP10636 758 aaKnown RBP16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MCF2P10911 925 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 VCANP13611 3396 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 STAT6P42226 847 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 DLX2Q07687 328 aaPredicted RBP16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HAUS6Q7Z4H7 955 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 FAM178BQ8IXR5 827 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 GSTCDQ8NEC7 633 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CASP10Q92851 521 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MRPL17Q9NRX2 175 aaKnown RBP16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TRAK2O60296 914 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TOM1L1O75674 476 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 GLP2RO95838 553 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SOD2P04179 222 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 URODP06132 367 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 IL9P15248 144 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 GRM5P41594 1212 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ZNF131P52739 623 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 NCKAP1LP55160 1127 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 COASYQ13057 564 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 KIAA1841Q6NSI8 718 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ZPBP2Q6X784 338 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TMEM184AQ6ZMB5 413 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ZBTB33Q86T24 672 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 BCL7CQ8WUZ0 217 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 NECAB3Q96P71 396 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CDT1Q9H211 546 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ANKFY1Q9P2R3 1169 aa16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 BARX2Q9UMQ3 279 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CLDN3O15551 220 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MBTPS2O43462 519 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CUTAO60888 179 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TADA2AO75478 443 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HOXB8P17481 243 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 BECN1Q14457 450 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MSLNLQ96KJ4 702 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PTPRHQ9HD43 1115 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CLEC1BQ9P126 229 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PTGESO14684 152 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CLASP2O75122 1294 aaKnown RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PROZP22891 400 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SSTR3P32745 418 aaPredicted RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 GLUD2P49448 558 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 LIG4P49917 911 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 OSTNP61366 133 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SMAD2Q15796 467 aaKnown RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 DYMQ7RTS9 669 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 AUTS2Q8WXX7 1259 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 KCNN1Q92952 543 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 LRRC27Q9C0I9 530 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 HCFC2Q9Y5Z7 792 aa16.8■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTP4A1P2-201ENST00000546033 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
PTP4A1P2-201ENST00000546033 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
PTP4A1P2-201ENST00000546033 C2CD2LO14523 706 aa16.79■□□□□ 0.28
PTP4A1P2-201ENST00000546033 BRD1O95696 1058 aa16.79■□□□□ 0.28
PTP4A1P2-201ENST00000546033 GAP43P17677 238 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms