RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CASP4P49662 377 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 RAB27AP51159 221 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 CYP2J2P51589 502 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 RABGGTBP53611 331 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 TYRO3Q06418 890 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 ENOX2Q16206 610 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 TTI2Q6NXR4 508 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 CBWD2Q8IUF1 395 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 TDHQ8IZJ6 230 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 NELFBQ8WX92 580 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 P2RX5Q93086 422 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 DUSP9Q99956 384 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 ELAC1Q9H777 363 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 MIOSQ9NXC5 875 aa17.78■□□□□ 0.44
LIMS2-217ENST00000545738 CPSF3Q9UKF6 684 aaKnown RBP17.78■□□□□ 0.44
LIMS2-217ENST00000545738 RALGAPA2Q2PPJ7 1873 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 LCHNA4D1U4 455 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 OGTO15294 1046 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 DGKIO75912 1065 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 NR3C1P04150 777 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 ADRB2P07550 413 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 MYOGP15173 224 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 ATP2A2P16615 1042 aaKnown RBP17.77■□□□□ 0.44
LIMS2-217ENST00000545738 CCNE1P24864 410 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 MLH1P40692 756 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 SLC10A6Q3KNW5 377 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 SPRED2Q7Z698 418 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 HERC6Q8IVU3 1022 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 C12orf56Q8IXR9 622 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 HELQQ8TDG4 1101 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-217ENST00000545738 ZNF689Q96CS4 500 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-217ENST00000545738 GAD1Q99259 594 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 FAM213AQ9BRX8 229 aa17.77■□□□□ 0.44
LIMS2-217ENST00000545738 GZF1Q9H116 711 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-217ENST00000545738 TRANK1O15050 2925 aa17.77■□□□□ 0.43
LIMS2-217ENST00000545738 REV3LO60673 3130 aa17.77■□□□□ 0.43
LIMS2-217ENST00000545738 PTGESO14684 152 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 OFD1O75665 1012 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 EOMESO95936 686 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 SLFN12LQ6IEE8 588 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 LRRC55Q6ZSA7 311 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 FBXL18Q96ME1 805 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 ZMAT2Q96NC0 199 aaKnown RBP17.76■□□□□ 0.43
LIMS2-217ENST00000545738 CASD1Q96PB1 797 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 PCDHB7Q9Y5E2 793 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 KIAA1671Q9BY89 1806 aa17.76■□□□□ 0.43
LIMS2-217ENST00000545738 ARL5CA6NH57 179 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 ITGA4P13612 1032 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PBX2P40425 430 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SPAG1Q07617 926 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PAK1Q13153 545 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 ALKAL1Q6UXT8 129 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 HS2ST1Q7LGA3 356 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 ZC3H3Q8IXZ2 948 aaKnown RBP17.75■□□□□ 0.43
LIMS2-217ENST00000545738 MLKLQ8NB16 471 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 RDH13Q8NBN7 331 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PLEKHO2Q8TD55 490 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 TMEM174Q8WUU8 243 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 DHTKD1Q96HY7 919 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SLC9A7Q96T83 725 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 RSAD1Q9HA92 442 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PARP2Q9UGN5 583 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 TDRD15B5MCY1 1934 aaKnown RBP17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PSMA7O14818 248 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 AKAP3O75969 853 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 LINC00271P0C7V0 271 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 NR2F2P24468 414 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 HTRA4P83105 476 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-217ENST00000545738 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
LIMS2-217ENST00000545738 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SCARA3Q6AZY7 606 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SASS6Q6UVJ0 657 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SLC9A9Q8IVB4 645 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 SNX27Q96L92 541 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 CACNG4Q9UBN1 327 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 INPP5FQ9Y2H2 1132 aa17.75■□□□□ 0.43
LIMS2-217ENST00000545738 TTC26A0AVF1 554 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 EXTL3O43909 919 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 KIF20AO95235 890 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 SCNN1GP51170 649 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 NAB2Q15742 525 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 STX1AQ16623 288 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 NFIL3Q16649 462 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 EDRF1Q3B7T1 1238 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 XKR4Q5GH76 650 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 PRPF38BQ5VTL8 546 aaKnown RBP17.74■□□□□ 0.43
LIMS2-217ENST00000545738 FAM43BQ6ZT52 329 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-217ENST00000545738 GPD1LQ8N335 351 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 PHOSPHO2Q8TCD6 241 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 NOC3LQ8WTT2 800 aaKnown RBP17.74■□□□□ 0.43
LIMS2-217ENST00000545738 ACAP3Q96P50 834 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 LRFN2Q9ULH4 789 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 YBX2Q9Y2T7 364 aaKnown RBP17.74■□□□□ 0.43
LIMS2-217ENST00000545738 PTPRJQ12913 1337 aa17.74■□□□□ 0.43
LIMS2-217ENST00000545738 INPPL1O15357 1258 aa17.73■□□□□ 0.43
LIMS2-217ENST00000545738 CALUO43852 315 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-217ENST00000545738 SKIP12755 728 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms