RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KCNH3Q9ULD8 1083 aa16.42■□□□□ 0.22
RTN3-214ENST00000545432 TARSP26639 723 aaKnown RBP16.41■□□□□ 0.22
RTN3-214ENST00000545432 NTHL1P78549 312 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
RTN3-214ENST00000545432 GRIK3Q13003 919 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
RTN3-214ENST00000545432 Q6ZUG5 572 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 ITFG1Q8TB96 612 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 BRF1Q92994 677 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
RTN3-214ENST00000545432 PARD6AQ9NPB6 346 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 XPNPEP1Q9NQW7 623 aa16.41■□□□□ 0.22
RTN3-214ENST00000545432 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 ERLIN2O94905 339 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
RTN3-214ENST00000545432 NLRP5P59047 1200 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 UBXN2BQ14CS0 331 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 EMC2Q15006 297 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 EPHA7Q15375 998 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 TTPALQ9BTX7 342 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 SLC26A6Q9BXS9 759 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 AVENQ9NQS1 362 aaPredicted RBP16.4■□□□□ 0.22
RTN3-214ENST00000545432 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
RTN3-214ENST00000545432 MIA3Q5JRA6 1907 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 COL4A3Q01955 1670 aa16.4■□□□□ 0.22
RTN3-214ENST00000545432 DCDC2BA2VCK2 349 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NCAM2O15394 837 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 SLC37A4O43826 429 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 TADA2AO75478 443 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 ECI2O75521 394 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 C8AP07357 584 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 CPA1P15085 419 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 CD72P21854 359 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 RAB33AQ14088 237 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NAB2Q15742 525 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 GALNT17Q6IS24 598 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 POTEHQ6S545 545 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 PRSS55Q6UWB4 352 aaPredicted RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 OTUD6AQ7L8S5 288 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 GLYCTKQ8IVS8 523 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NPAS3Q8IXF0 933 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 HAS1Q92839 578 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 CPB2Q96IY4 423 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NXF3Q9H4D5 531 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 CDV3Q9UKY7 258 aaKnown RBP16.39■□□□□ 0.21
RTN3-214ENST00000545432 CHD8Q9HCK8 2581 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 NOTCH4Q99466 2003 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.212e-10■■■■■ 69.9
RTN3-214ENST00000545432 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.21
RTN3-214ENST00000545432 TBX3O15119 743 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 LRP3O75074 770 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 XYLBO75191 536 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 LYPLA2O95372 231 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 ARL2P36404 184 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 ADCY1Q08828 1119 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 SPIRE1Q08AE8 756 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
RTN3-214ENST00000545432 PPM1LQ5SGD2 360 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 PAAF1Q9BRP4 392 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 IER2Q9BTL4 223 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 GDE1Q9NZC3 331 aa16.38■□□□□ 0.21
RTN3-214ENST00000545432 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
RTN3-214ENST00000545432 CACNA1GO43497 2377 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 SLC30A4O14863 429 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 ZBTB39O15060 712 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 ADAM12O43184 909 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 AKAP5P24588 427 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 TUSC3Q13454 348 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 LIN9Q5TKA1 542 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 ZNF852Q6ZMS4 543 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 CELF5Q8N6W0 485 aaKnown RBP16.37■□□□□ 0.21
RTN3-214ENST00000545432 DNASE1L2Q92874 299 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 MTRQ99707 1265 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 LXNQ9BS40 222 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 CHRDQ9H2X0 955 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
RTN3-214ENST00000545432 USP24Q9UPU5 2620 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 INO80B-WBP1J3KQ70 363 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 SLITRK3O94933 977 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
RTN3-214ENST00000545432 NRLP54845 237 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 FGD1P98174 961 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 MTAPQ13126 283 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 CAPSQ13938 189 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 TFDP1Q14186 410 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 PSMD5Q16401 504 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 ST3GAL2Q16842 350 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms