RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 VPS45Q9NRW7 570 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 RBM28Q9NW13 759 aaKnown RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 POLIQ9UNA4 740 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 PIAS3Q9Y6X2 628 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 ZFYVE26Q68DK2 2539 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 BAZ2BQ9UIF8 2168 aaKnown RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 ZZEF1O43149 2961 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 ESYT2A0FGR8 921 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 ZNF197O14709 1029 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 PTPN2P17706 415 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 NTHL1P78549 312 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 POU5F1BQ06416 359 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 GRIK3Q13003 919 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 GAS6Q14393 721 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 SF3A2Q15428 464 aaKnown RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 AXDND1Q5T1B0 1012 aaPredicted RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 NOTUMQ6P988 496 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 ST13P5Q8NFI4 369 aaPredicted RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 GAB3Q8WWW8 586 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 RUFY2Q8WXA3 655 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 ZCCHC14Q8WYQ9 949 aaKnown RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 PGBD1Q96JS3 809 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 GAD1Q99259 594 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 APOL6Q9BWW8 343 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 PLA2G2FQ9BZM2 168 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 TRPV4Q9HBA0 871 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 DNMT3BQ9UBC3 853 aaKnown RBP8.15□□□□□ -1.1
COPA-207ENST00000545284 NEUROG3Q9Y4Z2 214 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 IPPQ9Y573 584 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 COL4A3BPQ9Y5P4 624 aa8.15□□□□□ -1.1
COPA-207ENST00000545284 MIA3Q5JRA6 1907 aa8.15□□□□□ -1.11
COPA-207ENST00000545284 hCG_1642624A0A1W2PR95 340 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 SH2B2O14492 632 aaPredicted RBP8.14□□□□□ -1.11
COPA-207ENST00000545284 AXIN1O15169 862 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 CCL16O15467 120 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 DKC1O60832 514 aaKnown RBP eCLIP8.14□□□□□ -1.11
COPA-207ENST00000545284 RPP40O75818 363 aaKnown RBP8.14□□□□□ -1.11
COPA-207ENST00000545284 RHOP08100 348 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 RPL17P18621 184 aaKnown RBP8.14□□□□□ -1.11
COPA-207ENST00000545284 SCNN1GP51170 649 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 USP11P51784 963 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 AAMPQ13685 434 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
COPA-207ENST00000545284 PSMD5Q16401 504 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 PRR16Q569H4 304 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 RTP2Q5QGT7 225 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 SYNE3Q6ZMZ3 975 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 SGMS1Q86VZ5 419 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 MFSD6LQ8IWD5 586 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 LEMD2Q8NC56 503 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 CCDC12Q8WUD4 166 aaPredicted RBP8.14□□□□□ -1.11
COPA-207ENST00000545284 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 MCRS1Q96EZ8 462 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 NLRP4Q96MN2 994 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 ASB16Q96NS5 453 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 SCNM1Q9BWG6 230 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 GPR88Q9GZN0 384 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 CSRNP2Q9H175 543 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 MSRB2Q9Y3D2 182 aa8.14□□□□□ -1.11
COPA-207ENST00000545284 FRYQ5TBA9 3013 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 ARHGEF37A1IGU5 675 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 FAM221BA6H8Z2 402 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 H0Y626 953 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 ZNF263O14978 683 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 PRC1O43663 620 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 GAS7O60861 476 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 ATG13O75143 517 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 ERLIN2O94905 339 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 STBD1O95210 358 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 TRIM16O95361 564 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 FCARP24071 287 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 CCNE1P24864 410 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 GNA11P29992 359 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 RDXP35241 583 aaKnown RBP8.13□□□□□ -1.11
COPA-207ENST00000545284 MPLP40238 635 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 MLH1P40692 756 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 ZNF252P-AS1Q0IIN9 211 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 FOXC1Q12948 553 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 TUSC3Q13454 348 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 SH3PXD2AQ5TCZ1 1133 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 FAM171A1Q5VUB5 890 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 PRSS55Q6UWB4 352 aaPredicted RBP8.13□□□□□ -1.11
COPA-207ENST00000545284 RALGPS2Q86X27 583 aaPredicted RBP8.13□□□□□ -1.11
COPA-207ENST00000545284 GLYCTKQ8IVS8 523 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 CAMKK1Q8N5S9 505 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 GSTCDQ8NEC7 633 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 TCP11Q8WWU5 503 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 PSPC1Q8WXF1 523 aaKnown RBP8.13□□□□□ -1.11
COPA-207ENST00000545284 SMARCD2Q92925 531 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 LENG9Q96B70 501 aa8.13□□□□□ -1.11
COPA-207ENST00000545284 B3GALT6Q96L58 329 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms