RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PSMC5P62195 406 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 KCNA1Q09470 495 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PSMD2Q13200 908 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 LAPTM4AQ15012 233 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 ZRSR1Q15695 479 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 QPCTQ16769 361 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PLPP4Q5VZY2 271 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SYCE2Q6PIF2 218 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SASS6Q6UVJ0 657 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 LRRC55Q6ZSA7 311 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SV2BQ7L1I2 683 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 CATSPER3Q86XQ3 398 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 CKAP2LQ8IYA6 745 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 LRRC43Q8N309 656 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 LINC01465Q8N7H1 131 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SYT2Q8N9I0 419 aaPredicted RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 MLKLQ8NB16 471 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 LARP4BQ92615 738 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 RAD54LQ92698 747 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 CCDC47Q96A33 483 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 KCTD12Q96CX2 325 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PAGE5Q96GU1 130 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 EIF2AK1Q9BQI3 630 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 BPIFA3Q9BQP9 254 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 FUCA2Q9BTY2 467 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 NAT10Q9H0A0 1025 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 C17orf75Q9HAS0 396 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 ENTPD7Q9NQZ7 604 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 ANKEF1Q9NU02 776 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 RNF19AQ9NV58 838 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SEL1LQ9UBV2 794 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PUF60Q9UHX1 559 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 DACH1Q9UI36 760 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 TECTAO75443 2155 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 MAGEB2O15479 319 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 GAS2O43903 313 aaKnown RBP7.25□□□□□ -1.25
CDCA3-209ENST00000544610 LILRB3O75022 631 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 SLITRK3O94933 977 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 RHOBTB3O94955 611 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 GUCY2CP25092 1073 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 PBX3P40426 434 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 CLCN3P51790 818 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 NLRP11P59045 1033 aaKnown RBP7.25□□□□□ -1.25
CDCA3-209ENST00000544610 DPYDQ12882 1025 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 KARSQ15046 597 aaKnown RBP7.25□□□□□ -1.25
CDCA3-209ENST00000544610 STX1AQ16623 288 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 KCNT2Q6UVM3 1135 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 OTUD6AQ7L8S5 288 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 MIER3Q7Z3K6 550 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 ECHDC2Q86YB7 292 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 METTL13Q8N6R0 699 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 RASSF8Q8NHQ8 419 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 SMARCE1Q969G3 411 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 FAM167AQ96KS9 214 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 ZNF558Q96NG5 402 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 PNMA5Q96PV4 448 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 MAP7D2Q96T17 732 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 TRIM9Q9C026 710 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 ADAMTS10Q9H324 1103 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 UNC45AQ9H3U1 944 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 BLOC1S4Q9NUP1 217 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 GABBR1Q9UBS5 961 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 ODF2LQ9ULJ1 636 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 USTQ9Y2C2 406 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 NR2E1Q9Y466 385 aa7.25□□□□□ -1.25
CDCA3-209ENST00000544610 CFAP54Q96N23 3096 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 A0A087X0B3 334 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 FRMD3A2A2Y4 597 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 C2orf71A6NGG8 1288 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 EML1O00423 815 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 ZNF862O60290 1169 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 KIF20AO95235 890 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 MAPTP10636 758 aaKnown RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 DARSP14868 501 aaKnown RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 NDUFV2P19404 249 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 EIF4BP23588 611 aaKnown RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 TMOD1P28289 359 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 ERCC5P28715 1186 aaPredicted RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 AVPR2P30518 371 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 GPC3P51654 580 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 SLC12A3P55017 1021 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 KRT17Q04695 432 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 ITIH3Q06033 890 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 EHHADHQ08426 723 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 MTMR3Q13615 1198 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 SMC1AQ14683 1233 aaKnown RBP7.24□□□□□ -1.25
CDCA3-209ENST00000544610 UVSSAQ2YD98 709 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 XKR3Q5GH77 459 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 CLLU1OSQ5K130 101 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 NCAPH2Q6IBW4 605 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 EFCAB12Q6NXP0 572 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 LLGL2Q6P1M3 1020 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 UNC13DQ70J99 1090 aa7.24□□□□□ -1.25
CDCA3-209ENST00000544610 TMC7Q7Z402 723 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms