RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 RAD54LQ92698 747 aa15.29■□□□□ 0.04
VAMP1-208ENST00000544432 EMILIN2Q9BXX0 1053 aa15.29■□□□□ 0.04
VAMP1-208ENST00000544432 MRPL17Q9NRX2 175 aaKnown RBP15.29■□□□□ 0.04
VAMP1-208ENST00000544432 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
VAMP1-208ENST00000544432 USP15Q9Y4E8 981 aaPredicted RBP15.29■□□□□ 0.04
VAMP1-208ENST00000544432 HCFC2Q9Y5Z7 792 aa15.29■□□□□ 0.04
VAMP1-208ENST00000544432 C5orf42Q9H799 3197 aa15.29■□□□□ 0.04
VAMP1-208ENST00000544432 PTGESO14684 152 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 SLC16A4O15374 487 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 C1RP00736 705 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 THP07101 528 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 MAPTP10636 758 aaKnown RBP15.28■□□□□ 0.04
VAMP1-208ENST00000544432 MCF2P10911 925 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 GRM5P41594 1212 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 ZNF131P52739 623 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 KIAA0319Q5VV43 1072 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 AUTS2Q8WXX7 1259 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
VAMP1-208ENST00000544432 RXFP1Q9HBX9 757 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 DZANK1Q9NVP4 752 aa15.28■□□□□ 0.04
VAMP1-208ENST00000544432 PI4K2BG5E9Z4 385 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 ABLIM1O14639 778 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 URODP06132 367 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 MARCKSP29966 332 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-208ENST00000544432 SSTR3P32745 418 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-208ENST00000544432 NASPP49321 788 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-208ENST00000544432 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 DSG1Q02413 1049 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 ITIH3Q06033 890 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 RAD51AP2Q09MP3 1159 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 STRN3Q13033 797 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 MCM6Q14566 821 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 NAB2Q15742 525 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 XKR4Q5GH76 650 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 LLGL2Q6P1M3 1020 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 MPZL3Q6UWV2 235 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 ALKAL1Q6UXT8 129 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 ZPBP2Q6X784 338 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 TAS1R1Q7RTX1 841 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 GPBP1Q86WP2 473 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 RASSF8Q8NHQ8 419 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 EPSTI1Q96J88 318 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 KLHL5Q96PQ7 755 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 USP28Q96RU2 1077 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-208ENST00000544432 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 CDT1Q9H211 546 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 STK17AQ9UEE5 414 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 ADAM28Q9UKQ2 775 aa15.27■□□□□ 0.04
VAMP1-208ENST00000544432 NPHP3-ACAD11A0A0J9YXS1 232 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 TADA2AO75478 443 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 TOM1L1O75674 476 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 CNPP09543 421 aaKnown RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 ABCD1P33897 745 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 CA8P35219 290 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 GLUD2P49448 558 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 CBX2Q14781 532 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 FUT10Q6P4F1 479 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 USP49Q70CQ1 688 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 KRI1Q8N9T8 703 aaKnown RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 LARP4BQ92615 738 aaKnown RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 ADAM7Q9H2U9 754 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 PARVGQ9HBI0 331 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 TOPORSQ9NS56 1045 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-208ENST00000544432 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
VAMP1-208ENST00000544432 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
VAMP1-208ENST00000544432 LOC730098B7Z3J9 87 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 F8W810 466 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 ALADP13716 330 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 KLRC2P26717 231 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 TXLNAP40222 546 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 CLCN4P51793 760 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
VAMP1-208ENST00000544432 ZNF568Q3ZCX4 644 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 CES5AQ6NT32 575 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 HAUS6Q7Z4H7 955 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 KHSRPQ92945 711 aaKnown RBP eCLIP15.25■□□□□ 0.03
VAMP1-208ENST00000544432 CLIC6Q96NY7 704 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 NECTIN4Q96NY8 510 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 ACAP3Q96P50 834 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 TCHPQ9BT92 498 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 GPR62Q9BZJ7 368 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 EPHX3Q9H6B9 360 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.25■□□□□ 0.03
VAMP1-208ENST00000544432 FNIP2Q9P278 1114 aa15.25■□□□□ 0.03
VAMP1-208ENST00000544432 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 SMIM28A0A1B0GU29 152 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 TMEM189-UBE2V1I3L0A0 370 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 FAM13AO94988 1023 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms