RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MLH1P40692 756 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 LIFRP42702 1097 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 ZBED2Q9BTP6 218 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 TSSK1BQ9BXA7 367 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 ARL2BPQ9Y2Y0 163 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 TRIM66O15016 1216 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 FCER1AP12319 257 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 ITPRIPL1Q6GPH6 555 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 TTC23LQ6PF05 361 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 C20orf96Q9NUD7 363 aaPredicted RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 BAG6P46379 1132 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 BEST2Q8NFU1 509 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 GRAMD1AQ96CP6 724 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 IL1RL2Q9HB29 575 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 CLCA2Q9UQC9 943 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 ZNF513Q8N8E2 541 aaPredicted RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 OTUB1Q96FW1 271 aaPredicted RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 THTPAQ9BU02 230 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 AIM2O14862 343 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 ZNF263O14978 683 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 CDR2LQ86X02 465 aaPredicted RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 RMDN3Q96TC7 470 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 LIMA1Q9UHB6 759 aaKnown RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 HMOX2P30519 316 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 P3H1Q32P28 736 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 LRRC8BQ6P9F7 803 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 ELMOD1Q8N336 334 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 SLC7A5P2Q9GIP4 190 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 ZFATQ9P243 1243 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
CHD4-210ENST00000544040 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
CHD4-210ENST00000544040 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 ELMO2Q96JJ3 720 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 EXOSC4Q9NPD3 245 aaKnown RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 TBC1D23Q9NUY8 699 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 STAP1Q9ULZ2 295 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 PLOD1Q02809 727 aaPredicted RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 USP33Q8TEY7 942 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 BPIFA3Q9BQP9 254 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 TRIM54Q9BYV2 358 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 CYP26A1O43174 497 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 TLR2O60603 784 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 MCAMP43121 646 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
CHD4-210ENST00000544040 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 PCMTD2Q9NV79 361 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 USE1Q9NZ43 259 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 SASH1O94885 1247 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 PHKA2P46019 1235 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 SRLQ86TD4 932 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
CHD4-210ENST00000544040 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 ZBTB5O15062 677 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 MYBL1P10243 752 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 SERPINB3P29508 390 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 SLC30A5Q8TAD4 765 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 ZNF302Q9NR11 478 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 PARVAQ9NVD7 372 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 RHBDL2Q9NX52 303 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 A8MXQ7 604 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 GYS1P13807 737 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 HOXA7P31268 230 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 TMED10P49755 219 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 GRIN1Q05586 938 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 TOPORSQ9NS56 1045 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 FKBP9O95302 570 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 FKBP9P1Q75LS8 142 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 YIPF2Q9BWQ6 316 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 KIAA1586Q9HCI6 787 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 LCMT1Q9UIC8 334 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 ADGRA2Q96PE1 1338 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms