RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZBTB16Q05516 673 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 CMPK2Q5EBM0 449 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 NSUN4Q96CB9 384 aaKnown RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 DTNBP1Q96EV8 351 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 CYTH2Q99418 400 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ZSWIM1Q9BR11 485 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 CCDC77Q9BR77 488 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 NINJ2Q9NZG7 142 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 NENFQ9UMX5 172 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 EYA4O95677 639 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 HSPA6P17066 643 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 STAT3P40763 770 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 JAM2P57087 298 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 KCNA1Q09470 495 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG8-202ENST00000543872 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 SLC13A5Q86YT5 568 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 PTPRN2Q92932 1015 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 BCORQ6W2J9 1755 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 A0A0G2JND7 137 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CYP11B2P19099 503 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CA4P22748 312 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CTNNA2P26232 953 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
SMG8-202ENST00000543872 KNOP1Q1ED39 458 aaKnown RBP13.5□□□□□ -0.25
SMG8-202ENST00000543872 SGO2Q562F6 1265 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CFAP157Q5JU67 520 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 SLC20A1Q8WUM9 679 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 WDR60Q8WVS4 1066 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
SMG8-202ENST00000543872 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 PDP2Q9P2J9 529 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
SMG8-202ENST00000543872 ANKRD62A6NC57 917 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CDH16O75309 829 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 PSMG1O95456 288 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 NR3C1P04150 777 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
SMG8-202ENST00000543872 LYNP07948 512 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 POLD1P28340 1107 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 SPARCL1Q14515 664 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 EDRF1Q3B7T1 1238 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 NSMFQ6X4W1 530 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 TIPINQ9BVW5 301 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
SMG8-202ENST00000543872 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 EXOC3O60645 756 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 SPATA31D3P0C874 917 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 PAX3P23760 479 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 RTP1P59025 263 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 OCRLQ01968 901 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 SPATA31D4Q6ZUB0 917 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 GATA6Q92908 595 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 TUBGCP5Q96RT8 1024 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
SMG8-202ENST00000543872 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 NCANO14594 1321 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 OPHN1O60890 802 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 GCNT3O95395 438 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 CPA2P48052 419 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 USP46P62068 366 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 ZNF365Q70YC5 407 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 TTC1Q99614 292 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 ETNK2Q9NVF9 386 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 ARL8BQ9NVJ2 186 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 LNPEPQ9UIQ6 1025 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
SMG8-202ENST00000543872 HNRNPRO43390 633 aaKnown RBP13.49□□□□□ -0.25
SMG8-202ENST00000543872 ADCY7P51828 1080 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 INHBCP55103 352 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 HIC2Q96JB3 615 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 LZTS2Q9BRK4 669 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 CASZ1Q86V15 1759 aa13.49□□□□□ -0.25
SMG8-202ENST00000543872 MIF4GDA9UHW6 222 aaKnown RBP13.48□□□□□ -0.25
SMG8-202ENST00000543872 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
SMG8-202ENST00000543872 FAM200BP0CF97 657 aa13.48□□□□□ -0.25
SMG8-202ENST00000543872 TRIM49P0CI25 452 aa13.48□□□□□ -0.25
SMG8-202ENST00000543872 TRIM49CP0CI26 452 aa13.48□□□□□ -0.25
SMG8-202ENST00000543872 CETN2P41208 172 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms