RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 VIMP08670 466 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 ITGB5P18084 799 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 SLC8A1P32418 973 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 KCNJ1P48048 391 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 RARRES1P49788 294 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 MFAP3P55082 362 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CDR2Q01850 454 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CALCOCO2Q13137 446 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 SERPINB12Q96P63 405 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 DDX23Q9BUQ8 820 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 HOMER3Q9NSC5 361 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 DDX39AO00148 427 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 DHX15O43143 795 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 SNX3O60493 162 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 DLATP10515 647 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CYP11B1P15538 503 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 PDE6CP51160 858 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 HSD17B4P51659 736 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 NCKAP1LP55160 1127 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 KRT17Q04695 432 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 PPP1R7Q15435 360 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 NIPA1Q7RTP0 329 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 FAM160B2Q86V87 743 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 PPM1KQ8N3J5 372 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 HELQQ8TDG4 1101 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 DDX1Q92499 740 aaKnown RBP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTCD2-212ENST00000543322 ACP6Q9NPH0 428 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 ZHX2Q9Y6X8 837 aa13.85□□□□□ -0.19
PTCD2-212ENST00000543322 PSME4Q14997 1843 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 CLDN3O15551 220 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 IFNAR2P48551 515 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 GPC3P51654 580 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 MAP2K1Q02750 393 aaPredicted RBP13.84□□□□□ -0.19
PTCD2-212ENST00000543322 PTK6Q13882 451 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 VSTM1Q6UX27 236 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 HAUS6Q7Z4H7 955 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 CCDC25Q86WR0 208 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 LDHDQ86WU2 507 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 CCDC63Q8NA47 563 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
PTCD2-212ENST00000543322 ATP5DP30049 168 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 MAN1A1P33908 653 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 RIPK1Q13546 671 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 KRT39Q6A163 491 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 ACAD10Q6JQN1 1059 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 NSMFQ6X4W1 530 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 GPATCH11Q8N954 259 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 SNF8Q96H20 258 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 IWS1Q96ST2 819 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 POP1Q99575 1024 aaKnown RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 KCNH7Q9NS40 1196 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 TCEA3O75764 348 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 ITIH2P19823 946 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 IVDP26440 423 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 CHKAP35790 457 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 SNRNP35Q16560 246 aaKnown RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 HIBCHQ6NVY1 386 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 CBWD2Q8IUF1 395 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 ARHGEF2Q92974 986 aaKnown RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 PRMT6Q96LA8 375 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 NOD2Q9HC29 1040 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
PTCD2-212ENST00000543322 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-212ENST00000543322 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 GOLGA8IPA6NC78 632 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 GOLGA8JA6NMD2 632 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 SORBS3O60504 671 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 ACSL3O95573 720 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 QARSP47897 775 aaKnown RBP13.82□□□□□ -0.2
PTCD2-212ENST00000543322 NCALDP61601 193 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 SPP2Q13103 211 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 TNIP1Q15025 636 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
PTCD2-212ENST00000543322 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms