RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CCDC113Q9H0I3 377 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 PLEKHA4Q9H4M7 779 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 CHST7Q9NS84 486 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
RTN3-212ENST00000543123 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 KLK14Q9P0G3 267 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 FNIP2Q9P278 1114 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 KIAA1024Q9UPX6 916 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 DNM3Q9UQ16 869 aa14.47□□□□□ -0.09
RTN3-212ENST00000543123 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 RECQL4O94761 1208 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 THP07101 528 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 LIG1P18858 919 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 PRPHP41219 470 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 PTGDRQ13258 359 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 GSTCDQ8NEC7 633 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 DRC1Q96MC2 740 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 KIF2CQ99661 725 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
RTN3-212ENST00000543123 CCDC195A0A1B0GUA6 201 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 BRD1O95696 1058 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 DMP1Q13316 513 aaPredicted RBP14.45□□□□□ -0.1
RTN3-212ENST00000543123 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 ATF7IP2Q5U623 682 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 TAS1R1Q7RTX1 841 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 KCTD17Q8N5Z5 321 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 RIN2Q8WYP3 895 aaPredicted RBP14.45□□□□□ -0.1
RTN3-212ENST00000543123 TIPINQ9BVW5 301 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 GPR62Q9BZJ7 368 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 ZDHHC7Q9NXF8 308 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 SNTG2Q9NY99 539 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 KCNG1Q9UIX4 513 aa14.45□□□□□ -0.1
RTN3-212ENST00000543123 F8W810 466 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 H3BQV1 296 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 K7ERI5 159 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 ASGR2P07307 311 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 NBR1Q14596 966 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 ALYREFQ86V81 257 aaKnown RBP14.44□□□□□ -0.1
RTN3-212ENST00000543123 SMG7Q92540 1137 aaKnown RBP14.44□□□□□ -0.1
RTN3-212ENST00000543123 TTPALQ9BTX7 342 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 C17orf75Q9HAS0 396 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 PIDD1Q9HB75 910 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
RTN3-212ENST00000543123 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
RTN3-212ENST00000543123 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
RTN3-212ENST00000543123 PCDHB6Q9Y5E3 794 aa14.44□□□□□ -0.1
RTN3-212ENST00000543123 CLUHO75153 1309 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 CASTOR2A6NHX0 329 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 CCDC169A6NNP5 214 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 PTGESO14684 152 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 TGM5O43548 720 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 KIF4AO95239 1232 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 AVPR2P30518 371 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 MCM2P49736 904 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 MRE11P49959 708 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
RTN3-212ENST00000543123 YARSP54577 528 aaKnown RBP14.43□□□□□ -0.1
RTN3-212ENST00000543123 TDGQ13569 410 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 ECM1Q16610 540 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 LIN9Q5TKA1 542 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 PALB2Q86YC2 1186 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 PRSS33Q8NF86 280 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 UROC1Q96N76 676 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 CCDC94Q9BW85 323 aaPredicted RBP14.43□□□□□ -0.1
RTN3-212ENST00000543123 MRPL4Q9BYD3 311 aaKnown RBP14.43□□□□□ -0.1
RTN3-212ENST00000543123 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 KMT2EQ8IZD2 1858 aa14.43□□□□□ -0.1
RTN3-212ENST00000543123 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 TTLL13PA6NNM8 815 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 PAPLNO95428 1278 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
RTN3-212ENST00000543123 NPTX2P47972 431 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 PEX3P56589 373 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 ZNF568Q3ZCX4 644 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 IER5LQ5T953 404 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 FAM171A1Q5VUB5 890 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 TMEM134Q9H6X4 195 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
RTN3-212ENST00000543123 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.42□□□□□ -0.1
RTN3-212ENST00000543123 C2orf16Q68DN1 1984 aa14.42□□□□□ -0.1
RTN3-212ENST00000543123 TMEM189-UBE2V1I3L0A0 370 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms