RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PHOSPHO2Q8TCD6 241 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 TMC2Q8TDI7 906 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 NOC3LQ8WTT2 800 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ZNF689Q96CS4 500 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 PGBD4Q96DM1 585 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ACAP3Q96P50 834 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 TSG101Q99816 390 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 LBHD1Q9BQE6 289 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 MSTO1Q9BUK6 570 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 NAT10Q9H0A0 1025 aaKnown RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 GZF1Q9H116 711 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 DNAJC25Q9H1X3 360 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 HSD3B7Q9H2F3 369 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 RNF39Q9H2S5 420 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 PRO3102Q9H379 93 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 PCIF1Q9H4Z3 704 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 THAP9Q9H5L6 903 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ASB7Q9H672 318 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 TMEM161AQ9NX61 479 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 SNTG2Q9NY99 539 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 HSPBP1Q9NZL4 362 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 ZMYND8Q9ULU4 1186 aaPredicted RBP6.4□□□□□ -1.38
ABCF1-207ENST00000542772 IPPQ9Y573 584 aa6.4□□□□□ -1.38
ABCF1-207ENST00000542772 MICAL3Q7RTP6 2002 aa6.4□□□□□ -1.39
ABCF1-207ENST00000542772 TRIP11Q15643 1979 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 RBAK-RBAKDNI3L0D1 243 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 PMM2O15305 246 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 EXOC3O60645 756 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 OFD1O75665 1012 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 DGKIO75912 1065 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 AKAP3O75969 853 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NPTXRO95502 500 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 GNA14O95837 355 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ACRP10323 421 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ITGA4P13612 1032 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 KCNE1P15382 129 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ZNF18P17022 549 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NR2F2P24468 414 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 TNFSF9P41273 254 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ACOT2P49753 483 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 STX17P56962 302 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 WDR5P61964 334 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NOLC1Q14978 699 aaKnown RBP eCLIP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 PSMD6Q15008 389 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NAB2Q15742 525 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ENOX2Q16206 610 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 SNRNP35Q16560 246 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ZNF568Q3ZCX4 644 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 CDKAL1Q5VV42 579 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 TWF2Q6IBS0 349 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 KLHL10Q6JEL2 608 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 PSRC1Q6PGN9 363 aaPredicted RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ZBTB33Q86T24 672 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 GAS2L3Q86XJ1 694 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 NPAS4Q8IUM7 802 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 THNSL1Q8IYQ7 743 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 CSGALNACT2Q8N6G5 542 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 FAM200AQ8TCP9 573 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 PARD3BQ8TEW8 1205 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 ZNF516Q92618 1163 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 BICD1Q96G01 975 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 CCDC94Q9BW85 323 aaPredicted RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 CBX8Q9HC52 389 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 METTL14Q9HCE5 456 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 SAMSN1Q9NSI8 373 aaKnown RBP6.39□□□□□ -1.39
ABCF1-207ENST00000542772 RNF19AQ9NV58 838 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 FANCLQ9NW38 375 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 MIOSQ9NXC5 875 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 DERAQ9Y315 318 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 PCDHB7Q9Y5E2 793 aa6.39□□□□□ -1.39
ABCF1-207ENST00000542772 SMIM28A0A1B0GU29 152 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 MEIS3P2A8K0S8 358 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 LACTBL1A8MY62 500 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 H0YGN5 161 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 HOXA2O43364 376 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 IL18RAPO95256 599 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 AMHP03971 560 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 C4BPAP04003 597 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CYP3A5P20815 502 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 AKAP5P24588 427 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 MAGEA10P43363 369 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 AFF1P51825 1210 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 WNT7BP56706 349 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 HTRA4P83105 476 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 MYL5Q02045 173 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 MLLT1Q03111 559 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 SHHQ15465 462 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM132AQ24JP5 1023 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 SEZ6Q53EL9 994 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 ZBTB41Q5SVQ8 909 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 C1orf220Q5T0J3 134 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 C15orf39Q6ZRI6 1047 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 INTS8Q75QN2 995 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 OTOP2Q7RTS6 562 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms