RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CITO14578 2027 aa17.24■□□□□ 0.35
VPS33A-206ENST00000542310 PDCD11Q14690 1871 aaKnown RBP17.23■□□□□ 0.35
VPS33A-206ENST00000542310 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 C2CD2LO14523 706 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 TEX28O15482 410 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 RECQL4O94761 1208 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 SP100P23497 879 aaPredicted RBP17.23■□□□□ 0.35
VPS33A-206ENST00000542310 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
VPS33A-206ENST00000542310 HSP90AA2PQ14568 343 aaPredicted RBP17.23■□□□□ 0.35
VPS33A-206ENST00000542310 USP41Q3LFD5 358 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 DTHD1Q6ZMT9 781 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 ZBTB33Q86T24 672 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
VPS33A-206ENST00000542310 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 TMX3Q96JJ7 454 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 PRRX2Q99811 253 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 FNIP2Q9P278 1114 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 WDFY4Q6ZS81 3184 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
VPS33A-206ENST00000542310 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 PTGESO14684 152 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 EDN1P05305 212 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 THP07101 528 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 WEE2P0C1S8 567 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
VPS33A-206ENST00000542310 TMC5Q6UXY8 1006 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 TAS1R1Q7RTX1 841 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 FBXL6Q8N531 539 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 DRC1Q96MC2 740 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 SNTG2Q9NY99 539 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
VPS33A-206ENST00000542310 DOCK8Q8NF50 2099 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 F8W810 466 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 ELAVL2Q12926 359 aaKnown RBP17.21■□□□□ 0.35
VPS33A-206ENST00000542310 HYIQ5T013 277 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 ACSF2Q96CM8 615 aaPredicted RBP17.21■□□□□ 0.35
VPS33A-206ENST00000542310 GPR62Q9BZJ7 368 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 PLEKHA4Q9H4M7 779 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 ARHGAP28Q9P2N2 729 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
VPS33A-206ENST00000542310 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 TADA2AO75478 443 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 GJB2P29033 226 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 NAB2Q15742 525 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 IL17AQ16552 155 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 ARL6IP4Q66PJ3 421 aaKnown RBP17.2■□□□□ 0.34
VPS33A-206ENST00000542310 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 DAW1Q8N136 415 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
VPS33A-206ENST00000542310 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 ZDHHC7Q9NXF8 308 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 PIEZO1Q92508 2521 aa17.2■□□□□ 0.34
VPS33A-206ENST00000542310 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 PP2D1A8MPX8 630 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 E9PMD0 336 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 H3BQV1 296 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 K7ERI5 159 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 SLC26A4O43511 780 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 HIP1RO75146 1068 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 KIF4AO95239 1232 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 CD2BP2O95400 341 aaKnown RBP17.19■□□□□ 0.34
VPS33A-206ENST00000542310 LIG1P18858 919 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 GUCY2CP25092 1073 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 NPTX2P47972 431 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 PEX3P56589 373 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 MAPK7Q13164 816 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 NT5DC1Q5TFE4 455 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 RINT1Q6NUQ1 792 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 KANK3Q6NY19 840 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 PDXDC1Q6P996 788 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
VPS33A-206ENST00000542310 PIK3R5Q8WYR1 880 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 STAMQ92783 540 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
VPS33A-206ENST00000542310 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
VPS33A-206ENST00000542310 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
VPS33A-206ENST00000542310 CLUHO75153 1309 aa17.19■□□□□ 0.34
VPS33A-206ENST00000542310 BRD1O95696 1058 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 GRM5P41594 1212 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 NUBP1P53384 320 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 NHLH1Q02575 133 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 C1orf186Q6ZWK4 172 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 UROC1Q96N76 676 aa17.18■□□□□ 0.34
VPS33A-206ENST00000542310 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
VPS33A-206ENST00000542310 PAAF1Q9BRP4 392 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms