RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
RTN3-211ENST00000542238 RPL17P18621 184 aaKnown RBP17.1■□□□□ 0.33
RTN3-211ENST00000542238 RARRES1P49788 294 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
RTN3-211ENST00000542238 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
RTN3-211ENST00000542238 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
RTN3-211ENST00000542238 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 DOCK6Q96HP0 2047 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 LRRIQ4A6NIV6 560 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTN3-211ENST00000542238 FSHRP23945 695 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 NR5A1Q13285 461 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 TUSC3Q13454 348 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 HTR4Q13639 388 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 LIN9Q5TKA1 542 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 ZC3H14Q6PJT7 736 aaKnown RBP17.09■□□□□ 0.33
RTN3-211ENST00000542238 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 SLC2A4RGQ9NR83 387 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
RTN3-211ENST00000542238 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
RTN3-211ENST00000542238 USO1O60763 962 aaKnown RBP17.08■□□□□ 0.32
RTN3-211ENST00000542238 DCNP07585 359 aaKnown RBP17.08■□□□□ 0.32
RTN3-211ENST00000542238 HNRNPA1P09651 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
RTN3-211ENST00000542238 TXKP42681 527 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 PRSS55Q6UWB4 352 aaPredicted RBP17.08■□□□□ 0.32
RTN3-211ENST00000542238 CEP57Q86XR8 500 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 SHDQ96IW2 340 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 R4GN57 208 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 MIA3Q5JRA6 1907 aa17.08■□□□□ 0.32
RTN3-211ENST00000542238 NEMFO60524 1076 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 DTNBO60941 627 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
RTN3-211ENST00000542238 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 PPM1LQ5SGD2 360 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 FAM171A1Q5VUB5 890 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 MAEAQ7L5Y9 396 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 GRASPQ7Z6J2 395 aaPredicted RBP17.07■□□□□ 0.32
RTN3-211ENST00000542238 MCPH1Q8NEM0 835 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
RTN3-211ENST00000542238 FANCMQ8IYD8 2048 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CASTOR2A6NHX0 329 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 N4BP3O15049 544 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 XYLBO75191 536 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CTDNEP1O95476 244 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 THP07101 528 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 PSMD5Q16401 504 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 MTSS1LQ765P7 747 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 C1orf210Q8IVY1 113 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 PAAF1Q9BRP4 392 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CACNG4Q9UBN1 327 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 POLIQ9UNA4 740 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CACNA1AO00555 2505 aa17.06■□□□□ 0.32
RTN3-211ENST00000542238 CACNA1IQ9P0X4 2223 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 A0A087WWV3 80 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 KIF4AO95239 1232 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 C8AP07357 584 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 HOXA9P31269 272 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 STARD6P59095 220 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
RTN3-211ENST00000542238 TRIM29Q14134 588 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
RTN3-211ENST00000542238 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 ST13P5Q8NFI4 369 aaPredicted RBP17.05■□□□□ 0.32
RTN3-211ENST00000542238 PJA1Q8NG27 643 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 LNX1Q8TBB1 728 aaPredicted RBP17.05■□□□□ 0.32
RTN3-211ENST00000542238 FZD8Q9H461 694 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 GPRC5CQ9NQ84 441 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 SNTG2Q9NY99 539 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 DLGAP2Q9P1A6 1054 aa17.05■□□□□ 0.32
RTN3-211ENST00000542238 POTEMA6NI47 508 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 BTBD18B2RXH4 712 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 SP9P0CG40 484 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
RTN3-211ENST00000542238 GPC5P78333 572 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 MAPK6Q16659 721 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms