RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 PIGWQ7Z7B1 504 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 PROCA1Q8NCQ7 364 aaPredicted RBP7.27□□□□□ -1.25
NKRF-204ENST00000542113 FBXL13Q8NEE6 735 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 GIMAP7Q8NHV1 300 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 TMEM117Q9H0C3 514 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 PCIF1Q9H4Z3 704 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 ASIC3Q9UHC3 531 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 ZHX2Q9Y6X8 837 aa7.27□□□□□ -1.25
NKRF-204ENST00000542113 DCDC2CA8MYV0 355 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 O00370 1275 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 FSCN2O14926 492 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TBC1D12O60347 775 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SUN1O94901 812 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CYP11B1P15538 503 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 KRT76Q01546 638 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 GCNT1Q02742 428 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 LMNB2Q03252 620 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SNRNP35Q16560 246 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 TNFAIP8L3Q5GJ75 292 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PCNX4Q63HM2 1172 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ACAD10Q6JQN1 1059 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 MAP4K3Q8IVH8 894 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 RIBC1Q8N443 379 aaPredicted RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 IFT74Q96LB3 600 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CBWD1Q9BRT8 395 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SEMA4AQ9H3S1 761 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 KCNH7Q9NS40 1196 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CCPG1Q9ULG6 757 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 WDR64B1ANS9 1081 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ZBTB39O15060 712 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TCEA3O75764 348 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SGPL1O95470 568 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SHBGP04278 402 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SLURP2P0DP57 97 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PYGMP11217 842 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ATF2P15336 505 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 POLD1P28340 1107 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 MAPK4P31152 587 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 YWHABP31946 246 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 GSCP56915 257 aaPredicted RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 PSMC5P62195 406 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 UBXN2AP68543 259 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 FMO1Q01740 532 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PTP4A2Q12974 167 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PTK6Q13882 451 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PREPLQ4J6C6 727 aaPredicted RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 LIN9Q5TKA1 542 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TRIM72Q6ZMU5 477 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.26□□□□□ -1.25
NKRF-204ENST00000542113 CCDC63Q8NA47 563 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TRAIPQ9BWF2 469 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CCDC113Q9H0I3 377 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 BCAS3Q9H6U6 928 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 KIAA1586Q9HCI6 787 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 WRAP73Q9P2S5 460 aaPredicted RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 RBBP6Q7Z6E9 1792 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 SMIM23A6NLE4 172 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CYP26A1O43174 497 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ASNSP08243 561 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 RARAP10276 462 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CHRNB2P17787 502 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 NF2P35240 595 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 COPB2P35606 906 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ECE1P42892 770 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 DLG4P78352 724 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 KRT17Q04695 432 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 NR1H3Q13133 447 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 AUHQ13825 339 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 XRRA1Q6P2D8 792 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TTC27Q6P3X3 843 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 PPP1R21Q6ZMI0 780 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ARHGEF18Q6ZSZ5 1173 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 OTUD6AQ7L8S5 288 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 TRPM8Q7Z2W7 1104 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CCDC25Q86WR0 208 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 CCDC89Q8N998 374 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 MDM1Q8TC05 714 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SPIRE2Q8WWL2 714 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 GRAMD1AQ96CP6 724 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 IKZF4Q9H2S9 585 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 AGO4Q9HCK5 861 aaKnown RBP7.26□□□□□ -1.25
NKRF-204ENST00000542113 C1orf112Q9NSG2 853 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 UBIAD1Q9Y5Z9 338 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 AFF2P51816 1311 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 MYH11P35749 1972 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 SLX4Q8IY92 1834 aa7.26□□□□□ -1.25
NKRF-204ENST00000542113 FAM170AA1A519 330 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 DDX39AO00148 427 aaKnown RBP7.25□□□□□ -1.25
NKRF-204ENST00000542113 SORBS3O60504 671 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 MMP10P09238 476 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 FDX1P10109 184 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 FGFR4P22455 802 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 MARCKSL1P49006 195 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 MAP2K1Q02750 393 aaPredicted RBP7.25□□□□□ -1.25
NKRF-204ENST00000542113 RIPK1Q13546 671 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 MTMR1Q13613 665 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
NKRF-204ENST00000542113 TKFCQ3LXA3 575 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms