RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CPPED1Q9BRF8 314 aaPredicted RBP4.21□□□□□ -1.74
USP28-210ENST00000542033 POLR3GLQ9BT43 218 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 ENKD1Q9H0I2 346 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 VPS11Q9H270 941 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 MANSC1Q9H8J5 431 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 LANCL2Q9NS86 450 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 TMEM140Q9NV12 185 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 TRPS1Q9UHF7 1281 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 IP6K2Q9UHH9 426 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 G3BP2Q9UN86 482 aaKnown RBP4.21□□□□□ -1.74
USP28-210ENST00000542033 SH3BP1Q9Y3L3 701 aa4.21□□□□□ -1.74
USP28-210ENST00000542033 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 ADCY6O43306 1168 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 STC2O76061 302 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 RPLP2P05387 115 aaKnown RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 IL2RBP14784 551 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 VCAM1P19320 739 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 SREBF1P36956 1147 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 MAN2A2P49641 1150 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 MCL1Q07820 350 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 PIN1Q13526 163 aaPredicted RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 CNGB1Q14028 1251 aaPredicted RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 PRAMEF14Q5SWL7 426 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 USP51Q70EK9 711 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 FAM83AQ86UY5 434 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 C1orf210Q8IVY1 113 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 RHOT1Q8IXI2 618 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 CMTR2Q8IYT2 770 aaKnown RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 TRMT2AQ8IZ69 625 aaKnown RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 CPA6Q8N4T0 437 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 LILRA3Q8N6C8 439 aaPredicted RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 MB21D1Q8N884 522 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.2□□□□□ -1.74
USP28-210ENST00000542033 ST8SIA2Q92186 375 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 HSPBAP1Q96EW2 488 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 CYFIP2Q96F07 1278 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 CCDC136Q96JN2 1154 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 MOCS1Q9NZB8 636 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 HECAQ9UBI9 543 aaPredicted RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
USP28-210ENST00000542033 ARID4BQ4LE39 1312 aaPredicted RBP4.2□□□□□ -1.74
USP28-210ENST00000542033 ZMYM3Q14202 1370 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 CCDC154A6NI56 674 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 GOLGA6L6A8MZA4 724 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 PRR5-ARHGAP8B1AHC4 643 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 B5MCH6 92 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 TACR2P21452 398 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 WASP42768 502 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 FLT3LGP49771 235 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 RAB27AP51159 221 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 PTH1RQ03431 593 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 SP140Q13342 867 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 SEPT2Q15019 361 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 DCAF17Q5H9S7 520 aaPredicted RBP4.19□□□□□ -1.74
USP28-210ENST00000542033 PPP4R3AQ6IN85 833 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 RSPH3Q86UC2 560 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 REPS2Q8NFH8 660 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 FBXO18Q8NFZ0 1043 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 OR2I1PQ8NGU4 316 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 CCHCR1Q8TD31 782 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 ATXN2LQ8WWM7 1075 aaKnown RBP4.19□□□□□ -1.74
USP28-210ENST00000542033 HOXB13Q92826 284 aaPredicted RBP4.19□□□□□ -1.74
USP28-210ENST00000542033 COA7Q96BR5 231 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 PDCD2LQ9BRP1 358 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 LDAHQ9H6V9 325 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 SPON1Q9HCB6 807 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 TDP1Q9NUW8 608 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 PARPBPQ9NWS1 579 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 TCEAL9Q9UHQ7 104 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 ZNF180Q9UJW8 692 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 CLCA2Q9UQC9 943 aa4.19□□□□□ -1.74
USP28-210ENST00000542033 TEX33O43247 280 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 HTRA2O43464 458 aaPredicted RBP4.18□□□□□ -1.74
USP28-210ENST00000542033 AKAP10O43572 662 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 DTNBO60941 627 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 GPR32O75388 356 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 RAP2AP10114 183 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 PF4V1P10720 104 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ZSCAN20P17040 1043 aaPredicted RBP4.18□□□□□ -1.74
USP28-210ENST00000542033 HK1P19367 917 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ZXDAP98168 799 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 FOXE3Q13461 319 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 RRP1BQ14684 758 aaKnown RBP4.18□□□□□ -1.74
USP28-210ENST00000542033 ATP2B3Q16720 1220 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 FAM47AQ5JRC9 791 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 MIIPQ5JXC2 388 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 METTL24Q5JXM2 366 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 SPTY2D1Q68D10 685 aaPredicted RBP4.18□□□□□ -1.74
USP28-210ENST00000542033 DOK3Q7L591 496 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
USP28-210ENST00000542033 XYLT1Q86Y38 959 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 TMPRSS6Q8IU80 811 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 MDGA1Q8NFP4 955 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 STON2Q8WXE9 905 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 EXTL1Q92935 676 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 CEP95Q96GE4 821 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ANP32EQ9BTT0 268 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 GPR87Q9BY21 358 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ZNF341Q9BYN7 854 aa4.18□□□□□ -1.74
USP28-210ENST00000542033 ZNF703Q9H7S9 590 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms