RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
VARS2-212ENST00000542001 TLR2O60603 784 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 CAND2O75155 1236 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 HSPA6P17066 643 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 FAM160B1Q5W0V3 765 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ARHGEF19Q8IW93 802 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 KRT35Q92764 455 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ANKRD36BP1Q96IX9 119 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ADPGKQ9BRR6 497 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 MIS12Q9H081 205 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 KCND1Q9NSA2 647 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
VARS2-212ENST00000542001 PRKCEQ02156 737 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ADCY2Q08462 1091 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ARSHQ5FYA8 562 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ISCUQ9H1K1 167 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 CAPN9O14815 690 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 MAPK6Q16659 721 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
VARS2-212ENST00000542001 OTOP1Q7RTM1 612 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 SLIT3O75094 1523 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 MYH2Q9UKX2 1941 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 FGRP09769 529 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 PPATQ06203 517 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 TMEM62Q0P6H9 643 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 CYP4A22Q5TCH4 519 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 CCDC62Q6P9F0 684 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 EPN3Q9H201 632 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 SEMA4AQ9H3S1 761 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 SMYD2Q9NRG4 433 aa17.16■□□□□ 0.34
VARS2-212ENST00000542001 ARHGAP42A6NI28 874 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 H0YCG3 227 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 SLC16A3O15427 465 aaKnown RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 SYF2O95926 243 aaKnown RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 TROVE2P10155 538 aaKnown RBP eCLIP17.15■□□□□ 0.34
VARS2-212ENST00000542001 MSH2P43246 934 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 CHMP6Q96FZ7 201 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 ODF2LQ9ULJ1 636 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 PIAS1O75925 651 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 TMEM253P0C7T8 217 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 MARCKSL1P49006 195 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 RGS7P49802 495 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 ARSEP51690 589 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 PSMC1P62191 440 aaKnown RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 PDIA2Q13087 525 aaKnown RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 MED10Q9BTT4 135 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 I3L4J1 428 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
VARS2-212ENST00000542001 RALAP11233 206 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 RRM1P23921 792 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 CA8P35219 290 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 ZNF667Q5HYK9 610 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 DCLK2Q8N568 766 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
VARS2-212ENST00000542001 SLC8A3P57103 927 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 KCNT1Q5JUK3 1230 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 TMEM35BQ8NCS4 154 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 P3H4Q92791 437 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 WDR18Q9BV38 432 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 FGFR1OP2Q9NVK5 253 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 TXNDC9O14530 226 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 KITP10721 976 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 CAP2P40123 477 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 NPTX2P47972 431 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
VARS2-212ENST00000542001 MCEEQ96PE7 176 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 DNAI2Q9GZS0 605 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 MCF2LO15068 1137 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 GGPS1O95749 300 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 LLGL2Q6P1M3 1020 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 C1orf228Q6PIY5 440 aa17.14■□□□□ 0.33
VARS2-212ENST00000542001 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
VARS2-212ENST00000542001 RPF1Q9H9Y2 349 aaKnown RBP17.14■□□□□ 0.33
VARS2-212ENST00000542001 MT-ND3P03897 115 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 ARHGEF18Q6ZSZ5 1173 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 HIPK4Q8NE63 616 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 CNOT10Q9H9A5 744 aaKnown RBP17.13■□□□□ 0.33
VARS2-212ENST00000542001 RNF19AQ9NV58 838 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 PHBP35232 272 aa17.13■□□□□ 0.33
VARS2-212ENST00000542001 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms