RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FPR2P25090 351 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 TACR1P25103 407 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 PMLP29590 882 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 AFMP43652 599 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 MVKQ03426 396 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 PPATQ06203 517 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 PICALMQ13492 652 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 ZSCAN25Q6NSZ9 544 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 ABHD17CQ6PCB6 329 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 ERO1BQ86YB8 467 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 RIOX2Q8IUF8 465 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 CISD2Q8N5K1 135 aaKnown RBP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 OPTNQ96CV9 577 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 CLMNQ96JQ2 1002 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 SCYL1Q96KG9 808 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 WRNIP1Q96S55 665 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.41□□□□□ -1.384e-7■■■□□ 16.7
CPSF7-220ENST00000541963 AP5M1Q9H0R1 490 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 DHX36Q9H2U1 1008 aaKnown RBP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 METTL14Q9HCE5 456 aaKnown RBP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 TYW1Q9NV66 732 aaKnown RBP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 AATFQ9NY61 560 aaKnown RBP eCLIP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 DDX56Q9NY93 547 aaKnown RBP6.41□□□□□ -1.38
CPSF7-220ENST00000541963 B4GALT6Q9UBX8 382 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 NUDT5Q9UKK9 219 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 FZD1Q9UP38 647 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 THSD7BQ9C0I4 1608 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PPP1R11O60927 126 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 HLA-DOAP06340 250 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 CETPP11597 493 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 COL6A2P12110 1019 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PNLIPP16233 465 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PDE6AP16499 860 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ATP5JP18859 108 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 RHBDL3P58872 404 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 LACTBP83111 547 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 SNAPC2Q13487 334 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 VGLL4Q14135 290 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ARHGEF6Q15052 776 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ZMYM1Q5SVZ6 1142 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 RNF219Q5W0B1 726 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 OVCH1Q7RTY7 1134 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 STRA8Q7Z7C7 330 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 OSTM1Q86WC4 334 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 DCP2Q8IU60 420 aaKnown RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PASD1Q8IV76 773 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 FOXP4Q8IVH2 680 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 NLGN4XQ8N0W4 816 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 Q8N1Y9 231 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 NXPE1Q8N323 547 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 MAGEB6Q8N7X4 407 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PLEKHO2Q8TD55 490 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ZKSCAN4Q969J2 545 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 GCC1Q96CN9 775 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 OSBPL5Q9H0X9 879 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 BOLA2Q9H3K6 86 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 RWDD1Q9H446 243 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 RC3H2Q9HBD1 1191 aaKnown RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 CRTAC1Q9NQ79 661 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PIH1D3Q9NQM4 214 aaKnown RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ECHDC1Q9NTX5 307 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 MBNL3Q9NUK0 354 aaKnown RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 PI4KBQ9UBF8 816 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 ZNF112Q9UJU3 913 aa6.4□□□□□ -1.38
CPSF7-220ENST00000541963 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
CPSF7-220ENST00000541963 CCL15-CCL14A0A0B4J2E2 113 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SLC12A8A0AV02 714 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 PTPDC1A2A3K4 754 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 DDTLA6NHG4 134 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 GOLIM4O00461 696 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ERC2O15083 957 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 PSPNO60542 156 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 CTNND1O60716 968 aaKnown RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 HIP1RO75146 1068 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 NTRK1P04629 796 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 GUCY2FP51841 1108 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 KPNA1P52294 538 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 PPIL2Q13356 520 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF174Q15697 407 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SEPT7Q16181 437 aaKnown RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 CCL15Q16663 113 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SLC9C2Q5TAH2 1124 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ZFPM1Q8IX07 1006 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SCYL3Q8IZE3 742 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ABHD4Q8TB40 342 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 SH3RF3Q8TEJ3 882 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF384Q8TF68 577 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 TGFBRAP1Q8WUH2 860 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 ZCCHC17Q9NP64 241 aaKnown RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 PAG1Q9NWQ8 432 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 HERC5Q9UII4 1024 aaKnown RBP6.39□□□□□ -1.39
CPSF7-220ENST00000541963 DSEQ9UL01 958 aa6.39□□□□□ -1.39
CPSF7-220ENST00000541963 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 330.7 ms