RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 PTPAQ15257 358 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 C19orf54Q5BKX5 351 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 KRTAP5-11Q6L8G4 156 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 LRRC55Q6ZSA7 311 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 BHLHA9Q7RTU4 235 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 ULK2Q8IYT8 1036 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 GPR150Q8NGU9 434 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 LMBR1Q8WVP7 490 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 AUTS2Q8WXX7 1259 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 UHRF1Q96T88 793 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-210ENST00000541488 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 FZD1Q9UP38 647 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 MAP3K2Q9Y2U5 619 aa5.44□□□□□ -1.54
PRKDC-210ENST00000541488 CENPVL1A0A0U1RR11 272 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 FOXN1O15353 648 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 PRKD3O94806 890 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 PER3P56645 1201 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 PCSK4Q6UW60 755 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 Q6ZVL8 140 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 AHCYL2Q96HN2 611 aaKnown RBP5.43□□□□□ -1.54
PRKDC-210ENST00000541488 RAX2Q96IS3 184 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 ACE2Q9BYF1 805 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-210ENST00000541488 AKIP1Q9NQ31 210 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 DNAJC28Q9NX36 388 aa5.43□□□□□ -1.54
PRKDC-210ENST00000541488 USP15Q9Y4E8 981 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-210ENST00000541488 TMEM191CA6NGB0 347 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 BRINP1O60477 761 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 RAP2AP10114 183 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 MRPS9P82933 396 aaKnown RBP5.42□□□□□ -1.54
PRKDC-210ENST00000541488 NOMO1Q15155 1222 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 MUM1Q2TAK8 710 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 MST1LQ2TV78 715 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 PDCD4Q53EL6 469 aaKnown RBP5.42□□□□□ -1.54
PRKDC-210ENST00000541488 BTNL9Q6UXG8 535 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 PDZD4Q76G19 769 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-210ENST00000541488 RHOUQ7L0Q8 258 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 TRMT2AQ8IZ69 625 aaKnown RBP5.42□□□□□ -1.54
PRKDC-210ENST00000541488 GPR156Q8NFN8 814 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 LENG9Q96B70 501 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 SLC2A13Q96QE2 648 aa5.42□□□□□ -1.54
PRKDC-210ENST00000541488 CXorf49A8MYA2 514 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-210ENST00000541488 B5MCH6 92 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CLSTN1O94985 981 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 EYA4O95677 639 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CRHR1P34998 444 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CHN2P52757 468 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 ADRM1Q16186 407 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CCDC142Q17RM4 750 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 BMT2Q1RMZ1 405 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 METTL24Q5JXM2 366 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CPEB3Q8NE35 698 aaKnown RBP5.41□□□□□ -1.54
PRKDC-210ENST00000541488 ATL2Q8NHH9 583 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 DCLRE1CQ96SD1 692 aaKnown RBP5.41□□□□□ -1.54
PRKDC-210ENST00000541488 NEU1Q99519 415 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 PRRX2Q99811 253 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 SLC46A2Q9BY10 475 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 WDR11Q9BZH6 1224 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CCM2LQ9NUG4 571 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-210ENST00000541488 ZBTB21Q9ULJ3 1066 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 DNM3Q9UQ16 869 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 CHST2Q9Y4C5 530 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 PCDHGA2Q9Y5H1 932 aa5.41□□□□□ -1.54
PRKDC-210ENST00000541488 RNASET2O00584 256 aaKnown RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 PHF2O75151 1096 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 GASTP01350 101 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 RBP3P10745 1247 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 GSPT1P15170 499 aaKnown RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 ZSCAN20P17040 1043 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 ECHS1P30084 290 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 GPR3P46089 330 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 FLT3LGP49771 235 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 RGS19P49795 217 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 RRP12Q5JTH9 1297 aaKnown RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 ATXN7L2Q5T6C5 722 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 KCNK18Q7Z418 384 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 CMTR2Q8IYT2 770 aaKnown RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 PPM1NQ8N819 430 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 BEND2Q8NDZ0 799 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 FATE1Q969F0 183 aa5.4□□□□□ -1.54
PRKDC-210ENST00000541488 SENP6Q9GZR1 1112 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-210ENST00000541488 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 GPR39O43194 453 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 GCP02774 474 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 CPEP16870 476 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 FPR1P21462 350 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 BMP5P22003 454 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 SREBF1P36956 1147 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 CLRN1P58418 232 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-210ENST00000541488 MUM1L1Q5H9M0 696 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 FAM47AQ5JRC9 791 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 AFMIDQ63HM1 303 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 MED25Q71SY5 747 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 OR7D4Q8NG98 312 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 ZFP28Q8NHY6 868 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms