RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 MYCT1Q8N699 235 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 PARD3BQ8TEW8 1205 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 DHX15O43143 795 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 SART1O43290 800 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 NMT1P30419 496 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 FLT3P36888 993 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 USP11P51784 963 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 SREBF2Q12772 1141 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 ZNF211Q13398 564 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 PLEKHH3Q7Z736 793 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 GLYCTKQ8IVS8 523 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 YIPF3Q9GZM5 350 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 KCTD10Q9H3F6 313 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 AJAP1Q9UKB5 411 aaPredicted RBP15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 VAV3Q9UKW4 847 aa15.41■□□□□ 0.06
SFSWAP-210ENST00000541286 DNAJC25-GNG10A0A024R161 153 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 TLDC2A0PJX2 215 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 MARK3P27448 753 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 FLT3LGP49771 235 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 KNOP1Q1ED39 458 aaKnown RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 HSDL1Q3SXM5 330 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 ANKRD20A8PQ5CZ79 823 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 DYDC2Q96IM9 177 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 PON1P27169 355 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 VPS36Q86VN1 386 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 METTL13Q8N6R0 699 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 PRCCQ92733 491 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 ZNF668Q96K58 619 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 CALR3Q96L12 384 aaKnown RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 NAGPAQ9UK23 515 aa15.4■□□□□ 0.06
SFSWAP-210ENST00000541286 LGR5O75473 907 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 NR3C1P04150 777 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 H2AFZP0C0S5 128 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 TRIM49P0CI25 452 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 TRIM49CP0CI26 452 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 EPB41P11171 864 aaKnown RBP15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 C1QTNF8P60827 252 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 IFFO1Q0D2I5 559 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 GIT2Q14161 759 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 H2AFVQ71UI9 128 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 RUSC1Q9BVN2 902 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 ZCWPW1Q9H0M4 648 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 GANQ9H2C0 597 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 AGO4Q9HCK5 861 aaKnown RBP15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 MORF4L1Q9UBU8 362 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 NOC2LQ9Y3T9 749 aaKnown RBP15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 UBIAD1Q9Y5Z9 338 aa15.39■□□□□ 0.06
SFSWAP-210ENST00000541286 TTI1O43156 1089 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 FAM13AO94988 1023 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 MAGOHP61326 146 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 WLSQ5T9L3 541 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 MAGOHBQ96A72 148 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 NOD2Q9HC29 1040 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 GDF3Q9NR23 364 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 STK38LQ9Y2H1 464 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC25A27O95847 323 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 CCND2P30279 289 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 LACTBP83111 547 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 ITIH3Q06033 890 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 ORC2Q13416 577 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 GLE1Q53GS7 698 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 THEMIS2Q5TEJ8 643 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 RAPGEF5Q92565 580 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 CAVIN3Q969G5 261 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 MAML3Q96JK9 1138 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 TRIM51Q9BSJ1 452 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 EDEM3Q9BZQ6 932 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 MROH8Q9H579 483 aa15.39■□□□□ 0.05
SFSWAP-210ENST00000541286 PSMD10O75832 226 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 FDX1P10109 184 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 UBA1P22314 1058 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 IFNAR2P48551 515 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CCNA1P78396 465 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 STXBP2Q15833 593 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 IRF2BP2Q7Z5L9 587 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF296Q8WUU4 475 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 PLXNB2O15031 1838 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 FGGP02679 453 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 SPATA31C1P0DKV0 1188 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC12A3P55017 1021 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF792Q3KQV3 632 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CACNA2D3Q8IZS8 1091 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 KIF2BQ8N4N8 673 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 FBXL5Q9UKA1 691 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms