RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 PPM1LQ5SGD2 360 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 ZSWIM4Q9H7M6 989 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 KCNMB3Q9NPA1 279 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
UBC-209ENST00000541272 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
UBC-209ENST00000541272 SLC30A4O14863 429 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 LYPLA2O95372 231 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 RETP07949 1114 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBC-209ENST00000541272 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
UBC-209ENST00000541272 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
UBC-209ENST00000541272 SCNN1GP51170 649 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 TUSC3Q13454 348 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
UBC-209ENST00000541272 UBXN2BQ14CS0 331 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 SLC27A1Q6PCB7 646 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
UBC-209ENST00000541272 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 ELSPBP1Q96BH3 223 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 MTRQ99707 1265 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 MAFFQ9ULX9 164 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 CEP250Q9BV73 2442 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 ZFHX4Q86UP3 3567 aa13.05□□□□□ -0.32
UBC-209ENST00000541272 WDR87Q6ZQQ6 2873 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 DGAT1O75907 488 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 KRT37O76014 449 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 PAPSS2O95340 614 aaPredicted RBP13.04□□□□□ -0.32
UBC-209ENST00000541272 DEXIO95424 95 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 C8AP07357 584 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 CCR3P51677 355 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 EMC2Q15006 297 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 ADCK5Q3MIX3 580 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 SLFN12Q8IYM2 578 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
UBC-209ENST00000541272 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
UBC-209ENST00000541272 NCOR2Q9Y618 2525 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
UBC-209ENST00000541272 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 PSMA5P28066 241 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 LIMK1P53667 647 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 NPEPPSP55786 919 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 FZD5Q13467 585 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 AMHR2Q16671 573 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 FAM187BQ17R55 369 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
UBC-209ENST00000541272 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 Q6ZUG5 572 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 RPP25Q9BUL9 199 aaKnown RBP13.03□□□□□ -0.32
UBC-209ENST00000541272 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
UBC-209ENST00000541272 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 ANKEF1Q9NU02 776 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
UBC-209ENST00000541272 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
UBC-209ENST00000541272 MYH15Q9Y2K3 1946 aa13.02□□□□□ -0.32
UBC-209ENST00000541272 ZNF197O14709 1029 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 TDP2O95551 362 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 THP07101 528 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 TDGF1P13385 188 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 ARF4P18085 180 aaPredicted RBP13.02□□□□□ -0.33
UBC-209ENST00000541272 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
UBC-209ENST00000541272 HOXA6P31267 233 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 ARL2P36404 184 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 SHC2P98077 582 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 PSMD5Q16401 504 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 CSRP2Q16527 193 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
UBC-209ENST00000541272 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 AXDND1Q5T1B0 1012 aaPredicted RBP13.02□□□□□ -0.33
UBC-209ENST00000541272 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 IRF7Q92985 503 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 BRF1Q92994 677 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 E2F7Q96AV8 911 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 TCEANC2Q96MN5 208 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 UROC1Q96N76 676 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms