RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 COQ4Q9Y3A0 265 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 COL1A2P08123 1366 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 KIF5CO60282 957 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 URI1O94763 535 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 VNN1O95497 513 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 STAT1P42224 750 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 PSMC4P43686 418 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 EFNA5P52803 228 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 CLDN10P78369 228 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MAPK6Q16659 721 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 TRIB2Q92519 343 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ACP6Q9NPH0 428 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 RBAKQ9NYW8 714 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ANK1P16157 1881 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MACROD2A1Z1Q3 448 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 ACKR2O00590 384 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 TOM1L1O75674 476 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 F2P00734 622 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 CALCAP01258 141 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 TUBB4AP04350 444 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SMIM10L2AP0DMW4 78 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SMIM10L2BP0DMW5 78 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 ABCD1P33897 745 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF200P98182 395 aaPredicted RBP13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SPA17Q15506 151 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 KIAA0753Q2KHM9 967 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SLFN12LQ6IEE8 588 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 KIAA0319LQ8IZA0 1049 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 SOCS4Q8WXH5 440 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 CDHR5Q9HBB8 845 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 KAT6AQ92794 2004 aa13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 TRIP12Q14669 1992 aaPredicted RBP13.28□□□□□ -0.28
AP003559.1-201ENST00000540906 MAGEB2O15479 319 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 CLDN3O15551 220 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 PJA2O43164 708 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 MOCS3O95396 460 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 FGFR4P22455 802 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 GPC3P51654 580 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 MCL1Q07820 350 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 TMEM62Q0P6H9 643 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 TFDP1Q14186 410 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 ATF7IP2Q5U623 682 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 BRSK2Q8IWQ3 736 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 EXOC8Q8IYI6 725 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 CPB2Q96IY4 423 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 ARID3AQ99856 593 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 RAB20Q9NX57 234 aa13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 V9GYY5 206 aaPredicted RBP13.27□□□□□ -0.28
AP003559.1-201ENST00000540906 GPR25O00155 361 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 HAS3O00219 553 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 ENC1O14682 589 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 HLA-DRAP01903 254 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 MYL3P08590 195 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 FERP16591 822 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 SCP2P22307 547 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 GTF2H1P32780 548 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 FLT3LGP49771 235 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 OSTNP61366 133 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 PRKCZQ05513 592 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 PRPF4BQ13523 1007 aaKnown RBP13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 MFSD10Q14728 455 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 ZACNQ401N2 412 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 SLC30A5Q8TAD4 765 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 C2orf40Q9H1Z8 148 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 CDT1Q9H211 546 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 KIAA1586Q9HCI6 787 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 CPSF3Q9UKF6 684 aaKnown RBP13.27□□□□□ -0.29
AP003559.1-201ENST00000540906 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms