RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ZNF668Q96K58 619 aaPredicted RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NLRP4Q96MN2 994 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 GLT1D1Q96MS3 346 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 KIFC3Q9BVG8 833 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 FGFBP2Q9BYJ0 223 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF395Q9H8N7 513 aaPredicted RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 SAMSN1Q9NSI8 373 aaKnown RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 HDAC6Q9UBN7 1215 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 TBX20Q9UMR3 447 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NOD1Q9Y239 953 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 DOCK5Q9H7D0 1870 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 KCNJ18B7U540 433 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PES1O00541 588 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 CETN3O15182 167 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 CLIC2O15247 247 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 VTNP04004 478 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TPM3P06753 285 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 ATP1A3P13637 1013 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PHKA2P46019 1235 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 MTIF2P46199 727 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 RAB15P59190 212 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 FKBP3Q00688 224 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 SPAG1Q07617 926 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 KCNA1Q09470 495 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 ADAM9Q13443 819 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 KCNJ12Q14500 433 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 BMT2Q1RMZ1 405 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 CCDC40Q4G0X9 1142 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 FILIP1LQ4L180 1135 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 MARCH8Q5T0T0 291 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 CCSAPQ6IQ19 270 aaPredicted RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TTI2Q6NXR4 508 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 LYSMD3Q7Z3D4 306 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 DRC7Q8IY82 874 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 KIAA0319LQ8IZA0 1049 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TMEM151AQ8N4L1 468 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TMEM161BQ8NDZ6 487 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 EPS8L1Q8TE68 723 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 DIS3LQ8TF46 1054 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 DNAJB3Q8WWF6 145 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 EEF2KMTQ96G04 330 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PAWRQ96IZ0 340 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 MED15Q96RN5 788 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 DUSP9Q99956 384 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 SENP6Q9GZR1 1112 aaPredicted RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 C2orf40Q9H1Z8 148 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 ST6GALNAC4Q9H4F1 302 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 THAP9Q9H5L6 903 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TMPRSS4Q9NRS4 437 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 TYW1Q9NV66 732 aaKnown RBP7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 GINS2Q9Y248 185 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 FRMPD3Q5JV73 1810 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 PHLPP2Q6ZVD8 1323 aa7.27□□□□□ -1.25
CLTCL1-206ENST00000540896 SMIM35A0A1B0GVV1 85 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CDC14CA4D256 554 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ZBBXA8MT70 800 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 INO80B-WBP1J3KQ70 363 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 M0QZ92 97 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 HNRNPDLO14979 420 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TREHO43280 583 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CBFA2T2O43439 604 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 LILRA1O75019 489 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ADCY5O95622 1261 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 GNA14O95837 355 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 NR3C1P04150 777 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 COL6A1P12109 1028 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 NR2F2P24468 414 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 EEF1GP26641 437 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 HOXD13P35453 343 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 LIG4P49917 911 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CYP2J2P51589 502 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 UBASH3AP57075 661 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 NLRP11P59045 1033 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 SNRPFP62306 86 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF200P98182 395 aaPredicted RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 FANCCQ00597 558 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 NCBP1Q09161 790 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TMEM62Q0P6H9 643 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ITGA7Q13683 1181 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CAPSQ13938 189 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 MAPK6Q16659 721 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 EDRF1Q3B7T1 1238 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TCP11X2Q5H9J9 407 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CEP135Q66GS9 1140 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ARMCX5Q6P1M9 558 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TAF2Q6P1X5 1199 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 NECAB2Q7Z6G3 386 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 RSPH3Q86UC2 560 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CTAGE1Q96RT6 745 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 FIZ1Q96SL8 496 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TCHPQ9BT92 498 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 STRA6Q9BX79 667 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 INO80BQ9C086 356 aaPredicted RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 KCTD10Q9H3F6 313 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 C11orf49Q9H6J7 331 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 STARD7Q9NQZ5 370 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms