RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CPNE3O75131 537 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 RGS9O75916 674 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 SP9P0CG40 484 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 PPM1AP35813 382 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 ATXN1P54253 815 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 MFAP1P55081 439 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 ARHGAP8P85298 464 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 KRT17Q04695 432 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 APOBRQ0VD83 1088 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 TRAF1Q13077 416 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 PAK2Q13177 524 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 DOC2BQ14184 412 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 GRIK4Q16099 956 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 PCSK7Q16549 785 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 CCDC178Q5BJE1 867 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 MARCH8Q5T0T0 291 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 DCLK2Q8N568 766 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 MRPL43Q8N983 215 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 SUMF1Q8NBK3 374 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 GIMAP8Q8ND71 665 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 INPP4AQ96PE3 977 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 ZKSCAN3Q9BRR0 538 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 RTKNQ9BST9 563 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 TMX1Q9H3N1 280 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 CHMP4BQ9H444 224 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 CWH43Q9H720 699 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 JMJD4Q9H9V9 463 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 NPHS2Q9NP85 383 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 C1orf112Q9NSG2 853 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 WNT16Q9UBV4 365 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 CDH22Q9UJ99 828 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 DBR1Q9UK59 544 aaKnown RBP5.3□□□□□ -1.56
SNHG1-214ENST00000540865 DDX19BQ9UMR2 479 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 TRIM33Q9UPN9 1127 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 PCDHA1Q9Y5I3 950 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 TRPV2Q9Y5S1 764 aa5.3□□□□□ -1.56
SNHG1-214ENST00000540865 KDM3AQ9Y4C1 1321 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 PNMA6FA0A0J9YX94 578 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 C2orf71A6NGG8 1288 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 GCOM1H8Y6P7 765 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 DHX16O60231 1041 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 FGAP02671 866 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ADRB1P08588 477 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 POLR2MP0CAP2 368 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ARP10275 920 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 HOXA13P31271 388 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 TCF7P36402 384 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 AFF1P51825 1210 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 FAM189BP81408 668 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 LMNB2Q03252 620 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 COL9A3Q14050 684 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 COL9A2Q14055 689 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 SMC1AQ14683 1233 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 BMS1Q14692 1282 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 NONOQ15233 471 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 FOXD4L6Q3SYB3 417 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ODR4Q5SWX8 454 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 RARS2Q5T160 578 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 FAM102BQ5T8I3 360 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 VPS53Q5VIR6 699 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 TSHZ3Q63HK5 1081 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 CEP135Q66GS9 1140 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 XRRA1Q6P2D8 792 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 FOXD4L3Q6VB84 417 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 MFSD6Q6ZSS7 791 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 SLC24A5Q71RS6 500 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 OTOP3Q7RTS5 596 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 C1orf210Q8IVY1 113 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 NME8Q8N427 588 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 SEPT1Q8WYJ6 367 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 RIN2Q8WYP3 895 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 TNPO1Q92973 898 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 PMEPA1Q969W9 287 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 SPACA7Q96KW9 195 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ZNF558Q96NG5 402 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 OSMRQ99650 979 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 CELF4Q9BZC1 486 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 RNF41Q9H4P4 317 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ELAC1Q9H777 363 aaKnown RBP5.29□□□□□ -1.56
SNHG1-214ENST00000540865 KCNK12Q9HB15 430 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ATP6V0A4Q9HBG4 840 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 VAT1LQ9HCJ6 419 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 RGS18Q9NS28 235 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ERAP1Q9NZ08 941 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 IGSF9Q9P2J2 1179 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 ZZEF1O43149 2961 aa5.29□□□□□ -1.56
SNHG1-214ENST00000540865 NLRC5Q86WI3 1866 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ZMYM6O95789 1325 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 FRMPD4Q14CM0 1322 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TTC41PQ6P2S7 1318 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 DENND3A2RUS2 1198 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 C9IYK1 514 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ZBTB5O15062 677 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 MGEA5O60502 916 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms