RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 NLRP11P59045 1033 aaKnown RBP15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 DLG4P78352 724 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 MYL7Q01449 175 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CETN1Q12798 172 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 PSMD6Q15008 389 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 AMHR2Q16671 573 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CBWD6Q4V339 395 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CBWD3Q5JTY5 395 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CBWD5Q5RIA9 395 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 ATF7IP2Q5U623 682 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 MPZL3Q6UWV2 235 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CXCL17Q6UXB2 119 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CRELD2Q6UXH1 353 aaPredicted RBP15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 TDHQ8IZJ6 230 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 NME8Q8N427 588 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 GANQ9H2C0 597 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 ADAMTS10Q9H324 1103 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 KCND1Q9NSA2 647 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 GCNT4Q9P109 453 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 TNFSF13BQ9Y275 285 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 CNTNAP2Q9UHC6 1331 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 TREHO43280 583 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 FAM189A1O60320 539 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 GPR32O75388 356 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 ASGR1P07306 291 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 IQCF3P0C7M6 154 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 SLC9A1P19634 815 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 HNRNPH3P31942 346 aaKnown RBP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 ATN1P54259 1190 aaPredicted RBP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 PPP3CAQ08209 521 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 PCBP1Q15365 356 aaKnown RBP eCLIP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 MEA1Q16626 185 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 LRIT3Q3SXY7 679 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 TAF2Q6P1X5 1199 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 CACNA2D4Q7Z3S7 1137 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 SESTD1Q86VW0 696 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 TMTC1Q8IUR5 882 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 BAP1Q92560 729 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 SCLT1Q96NL6 688 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 FAM49AQ9H0Q0 323 aaPredicted RBP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 NUCKS1Q9H1E3 243 aaKnown RBP15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 GTF2IRD1Q9UHL9 959 aa15.46■□□□□ 0.06
CYB561A3-216ENST00000540755 ANK1P16157 1881 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 CUL9Q8IWT3 2517 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 LRRIQ3A6PVS8 624 aaPredicted RBP15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 OGTO15294 1046 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 B4GALT5O43286 388 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 CABYRO75952 493 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 MXI1P50539 228 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 CLDN10P78369 228 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 KCNA10Q16322 511 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 NBPF20Q3BBV1 942 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 TRIM65Q6PJ69 517 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 CYP26C1Q6V0L0 522 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 RNF180Q86T96 592 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 PPP1R13LQ8WUF5 828 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 CCDC127Q96BQ5 260 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 PPP1R16BQ96T49 567 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 TCHPQ9BT92 498 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 GCOM2Q9BZD3 368 aaPredicted RBP15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 TMEM117Q9H0C3 514 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 TMEM8AQ9HCN3 771 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 RBAKQ9NYW8 714 aaPredicted RBP15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 PLAGL2Q9UPG8 496 aa15.45■□□□□ 0.06
CYB561A3-216ENST00000540755 UCHL3P15374 230 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 GCLMP48507 274 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 ACOT2P49753 483 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 ZNF200P98182 395 aaPredicted RBP15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 CDK17Q00537 523 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 SNX17Q15036 470 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 TMEM132AQ24JP5 1023 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 KIZQ2M2Z5 673 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 ZNF568Q3ZCX4 644 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 EPC2Q52LR7 807 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 KRT39Q6A163 491 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 BRSK2Q8IWQ3 736 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 EHBP1Q8NDI1 1231 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 LMO3Q8TAP4 145 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 SYN2Q92777 582 aaPredicted RBP15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 SPTLC3Q9NUV7 552 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 ZNHIT6Q9NWK9 470 aaKnown RBP15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 MYO6Q9UM54 1294 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 COQ4Q9Y3A0 265 aa15.44■□□□□ 0.06
CYB561A3-216ENST00000540755 MOXD2PA6NHM9 499 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 SOWAHDA6NJG2 315 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 LRRC53A6NM62 1247 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 TSPAN1O60635 241 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 ERLIN2O94905 339 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 RPLP2P05387 115 aaKnown RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 MCF2P10911 925 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms